RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 OAS2P29728 719 aaKnown RBP12.71□□□□□ -0.37
LIG1-212ENST00000596549 KPNA2P52292 529 aaKnown RBP12.71□□□□□ -0.37
LIG1-212ENST00000596549 CDC20Q12834 499 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 TUBB3Q13509 450 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 SEMA3AQ14563 771 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 ITIH4Q14624 930 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 IL11RAQ14626 422 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 RPS6KA1Q15418 735 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 DNTTIP2Q5QJE6 756 aaKnown RBP12.71□□□□□ -0.37
LIG1-212ENST00000596549 KLHL35Q6PF15 583 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 PACS1Q6VY07 963 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 ZNF534Q76KX8 674 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 TAS2R42Q7RTR8 314 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 DNAAF3Q8N9W5 541 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 GALNT6Q8NCL4 622 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 STARD8Q92502 1023 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 UBXN4Q92575 508 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 ALS2CR12Q96Q35 445 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 RANBP9Q96S59 729 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 CD180Q99467 661 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 TLR10Q9BXR5 811 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 RAB6BQ9NRW1 208 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 HRASLS2Q9NWW9 162 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 BOD1L1Q8NFC6 3051 aa12.71□□□□□ -0.38
LIG1-212ENST00000596549 HEATR9A2RTY3 570 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 ZNF891A8MT65 544 aaPredicted RBP12.7□□□□□ -0.38
LIG1-212ENST00000596549 NKX2-8O15522 239 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 SPAG6O75602 509 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 GOT2P00505 430 aaKnown RBP12.7□□□□□ -0.38
LIG1-212ENST00000596549 APRTP07741 180 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 NDUFS1P28331 727 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 RPL22P35268 128 aaKnown RBP12.7□□□□□ -0.38
LIG1-212ENST00000596549 NSG1P42857 185 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 GSE1Q14687 1217 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.7□□□□□ -0.38
LIG1-212ENST00000596549 TSTD2Q5T7W7 516 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 ATP1A1-AS1Q5TC04 95 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 AFTPHQ6ULP2 937 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 PPP1R21Q6ZMI0 780 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 PPP1R3BQ86XI6 285 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 RASGRP3Q8IV61 690 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 ESX1Q8N693 406 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 SIDT2Q8NBJ9 832 aaKnown RBP12.7□□□□□ -0.38
LIG1-212ENST00000596549 ACVR1CQ8NER5 493 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 OR52E1Q8NGJ3 308 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 LKAAEAR1Q8TD35 194 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 ZFPM2Q8WW38 1151 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 CCM2Q9BSQ5 444 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 HGH1Q9BTY7 390 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 SMARCAL1Q9NZC9 954 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 PAK5Q9P286 719 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 POMT2Q9UKY4 750 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 TCAF1Q9Y4C2 921 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 RPS6KL1Q9Y6S9 549 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 NUP210LQ5VU65 1888 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 PCSK5Q92824 1860 aa12.7□□□□□ -0.38
LIG1-212ENST00000596549 B8ZZF3 427 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 E7EVH7 732 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 BTN3A3O00478 584 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 BTN3A1O00481 513 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 OR1I1O60431 355 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 AP2A2O94973 939 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 FGGP02679 453 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 PRKAR1AP10644 381 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 POLR2CP19387 275 aaPredicted RBP12.69□□□□□ -0.38
LIG1-212ENST00000596549 NFATC3Q12968 1075 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 RPA4Q13156 261 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 BOP1Q14137 746 aaKnown RBP12.69□□□□□ -0.38
LIG1-212ENST00000596549 GPR19Q15760 415 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 CCNG2Q16589 344 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 PWWP2BQ6NUJ5 590 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 DRICH1Q6PGQ1 229 aaPredicted RBP12.69□□□□□ -0.38
LIG1-212ENST00000596549 NAPRTQ6XQN6 538 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 ZNF605Q86T29 641 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 KMT5CQ86Y97 462 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 D2HGDHQ8N465 521 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 CCDC89Q8N998 374 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 UBE2Q2Q8WVN8 375 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 HDAC10Q969S8 669 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 KIAA1143Q96AT1 154 aaPredicted RBP12.69□□□□□ -0.38
LIG1-212ENST00000596549 STAMBPL1Q96FJ0 436 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 RUFY1Q96T51 708 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 ARHGAP9Q9BRR9 750 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 TRIT1Q9H3H1 467 aaKnown RBP12.69□□□□□ -0.38
LIG1-212ENST00000596549 VPS37BQ9H9H4 285 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 EIF2B3Q9NR50 452 aaKnown RBP12.69□□□□□ -0.38
LIG1-212ENST00000596549 FGF21Q9NSA1 209 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 STARD5Q9NSY2 213 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 LNPEPQ9UIQ6 1025 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 CROTQ9UKG9 612 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 RIMKLBQ9ULI2 386 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 BTRCQ9Y297 605 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 HEBP2Q9Y5Z4 205 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 COLEC10Q9Y6Z7 277 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 ZNF462Q96JM2 2506 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
LIG1-212ENST00000596549 UBA6A0AVT1 1052 aaPredicted RBP12.68□□□□□ -0.38
LIG1-212ENST00000596549 SLC5A10A0PJK1 596 aa12.68□□□□□ -0.38
LIG1-212ENST00000596549 IFRD1O00458 451 aaPredicted RBP12.68□□□□□ -0.38
LIG1-212ENST00000596549 ADRA1DP25100 572 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms