RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ACTR5Q9H9F9 607 aaPredicted RBP9.69□□□□□ -0.86
LIG1-209ENST00000596104 SYTL2Q9HCH5 934 aa9.69□□□□□ -0.86
LIG1-209ENST00000596104 ASF1BQ9NVP2 202 aa9.69□□□□□ -0.86
LIG1-209ENST00000596104 C5AR2Q9P296 337 aa9.69□□□□□ -0.86
LIG1-209ENST00000596104 SAE1Q9UBE0 346 aaPredicted RBP9.69□□□□□ -0.86
LIG1-209ENST00000596104 LUC7L2Q9Y383 392 aaKnown RBP9.69□□□□□ -0.86
LIG1-209ENST00000596104 PCSK5Q92824 1860 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 CENPEQ02224 2701 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 ABCA12Q86UK0 2595 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 TMEM150CB9EJG8 249 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 KLF7O75840 302 aaPredicted RBP9.68□□□□□ -0.86
LIG1-209ENST00000596104 PRAMEF1O95521 474 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 SLC35G4P0C7Q5 338 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 TMEM253P0C7T8 217 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 ST6GAL1P15907 406 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 PECAM1P16284 738 aaPredicted RBP9.68□□□□□ -0.86
LIG1-209ENST00000596104 MSH3P20585 1137 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 CYP2A7P20853 494 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 CDH3P22223 829 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 NDUFS1P28331 727 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 PRDX3P30048 256 aaKnown RBP9.68□□□□□ -0.86
LIG1-209ENST00000596104 AKT1P31749 480 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 PREPP48147 710 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 DYNLT1P63172 113 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 RAPSNQ13702 412 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 NR6A1Q15406 480 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 TAZQ16635 292 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 MFSD7Q6UXD7 560 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 MRGPREQ86SM8 312 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 DAAM2Q86T65 1068 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 IQCKQ8N0W5 287 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 CISD2Q8N5K1 135 aaKnown RBP9.68□□□□□ -0.86
LIG1-209ENST00000596104 OR4E2Q8NGC2 313 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 ZNF398Q8TD17 642 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 TFB1MQ8WVM0 346 aaKnown RBP9.68□□□□□ -0.86
LIG1-209ENST00000596104 INPP5DQ92835 1189 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 FCRL5Q96RD9 977 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 RANBP9Q96S59 729 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 BARD1Q99728 777 aaKnown RBP9.68□□□□□ -0.86
LIG1-209ENST00000596104 NRTNQ99748 197 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 FANCEQ9HB96 536 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 MAP10Q9P2G4 905 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 FAM8A1Q9UBU6 413 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 SLC5A6Q9Y289 635 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 B3GNT3Q9Y2A9 372 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 PKP3Q9Y446 797 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 COLEC10Q9Y6Z7 277 aa9.68□□□□□ -0.86
LIG1-209ENST00000596104 AGAP14A8MT82 685 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 F5H423 210 aaPredicted RBP9.67□□□□□ -0.86
LIG1-209ENST00000596104 GOLGA6L22H0YM25 854 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 H3BMH7 237 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 MATN2O00339 956 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 BTN3A3O00478 584 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 BTN3A1O00481 513 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 STX7O15400 261 aaKnown RBP9.67□□□□□ -0.86
LIG1-209ENST00000596104 POLBP06746 335 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 PYGMP11217 842 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 CDKN2BP42772 138 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 NR2C2P49116 596 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 LMAN1P49257 510 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 UBASH3AP57075 661 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 ADCY2Q08462 1091 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 PRKAA1Q13131 559 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 MYBPC3Q14896 1274 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 ZRANB3Q5FWF4 1079 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 IGFL3Q6UXB1 125 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 SPOCD1Q6ZMY3 1216 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 CDHR3Q6ZTQ4 885 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 RAB43Q86YS6 212 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 ZNF567Q8N184 647 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 ACVR1CQ8NER5 493 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 IPMKQ8NFU5 416 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 SLC35G2Q8TBE7 412 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 HM13Q8TCT9 377 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 LCN9Q8WX39 176 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 SGSM3Q96HU1 749 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 TRAPPC9Q96Q05 1148 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 DPH2Q9BQC3 489 aaPredicted RBP9.67□□□□□ -0.86
LIG1-209ENST00000596104 DHRS4Q9BTZ2 278 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 KLHL8Q9P2G9 620 aaPredicted RBP9.67□□□□□ -0.86
LIG1-209ENST00000596104 SERTAD3Q9UJW9 196 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 NTNG1Q9Y2I2 539 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 HEBP2Q9Y5Z4 205 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 ARL5AQ9Y689 179 aa9.67□□□□□ -0.86
LIG1-209ENST00000596104 PRRC2CQ9Y520 2896 aaKnown RBP9.67□□□□□ -0.86
LIG1-209ENST00000596104 GSAPA4D1B5 854 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 ANKUB1A6NFN9 424 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 C9J4A7 227 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 E7EQ34 232 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 ZNF749O43361 778 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 SRP72O76094 671 aaKnown RBP9.66□□□□□ -0.86
LIG1-209ENST00000596104 PVRP15151 417 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 OTX2P32243 289 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 HADHAP40939 763 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 ARHGAP25P42331 645 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 GABRA4P48169 554 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 PRLHRP49683 370 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 XIAPP98170 497 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 MPP3Q13368 585 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 GSE1Q14687 1217 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms