RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ESR1P03372 595 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 PIRTP0C851 137 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 NCF1P14598 390 aaPredicted RBP13.03□□□□□ -0.32
VRK3-209ENST00000594948 IDUAP35475 653 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 MAPK10P53779 464 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 GP2P55259 537 aaKnown RBP13.03□□□□□ -0.32
VRK3-209ENST00000594948 AP5B1Q2VPB7 878 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 ATG9BQ674R7 924 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 GPR149Q86SP6 731 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 ADAMTSL2Q86TH1 951 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 STK40Q8N2I9 435 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 SIDT2Q8NBJ9 832 aaKnown RBP13.03□□□□□ -0.32
VRK3-209ENST00000594948 SETD9Q8NE22 299 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 OR52B6Q8NGF0 335 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 NSMCE3Q96MG7 304 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 GABARAPL1Q9H0R8 117 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 FBXO8Q9NRD0 319 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
VRK3-209ENST00000594948 TRNAU1APQ9NX07 287 aaKnown RBP13.03□□□□□ -0.32
VRK3-209ENST00000594948 ABI2Q9NYB9 513 aaPredicted RBP13.03□□□□□ -0.32
VRK3-209ENST00000594948 FLRT1Q9NZU1 646 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 VAPAQ9P0L0 249 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 LIMD1Q9UGP4 676 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 ERVW-1Q9UQF0 538 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 EIF3LQ9Y262 564 aaKnown RBP13.03□□□□□ -0.32
VRK3-209ENST00000594948 SH3BP1Q9Y3L3 701 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 CCL27Q9Y4X3 112 aa13.03□□□□□ -0.32
VRK3-209ENST00000594948 POLR3HQ9Y535 204 aaPredicted RBP13.03□□□□□ -0.32
VRK3-209ENST00000594948 MAGED1Q9Y5V3 778 aaPredicted RBP13.03□□□□□ -0.32
VRK3-209ENST00000594948 MICAL3Q7RTP6 2002 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 TMEM189-UBE2V1I3L0A0 370 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 SLC28A1O00337 649 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 CXCR6O00574 342 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 OR7A17O14581 309 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 GNGT2O14610 69 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 RGS14O43566 566 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 DFNA5O60443 496 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 NIPSNAP2O75323 286 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 S100BP04271 92 aaPredicted RBP13.02□□□□□ -0.32
VRK3-209ENST00000594948 NTRK1P04629 796 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 IL6P05231 212 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 PCNAP12004 261 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 PCSK2P16519 638 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 CR2P20023 1033 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 TACR2P21452 398 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 ACVR2AP27037 513 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 HOXD9P28356 352 aaPredicted RBP13.02□□□□□ -0.32
VRK3-209ENST00000594948 GRK3P35626 688 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 SOX11P35716 441 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 DCTP40126 519 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 HALP42357 657 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 PTGER3P43115 390 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 HTR6P50406 440 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 KPNA1P52294 538 aaPredicted RBP13.02□□□□□ -0.32
VRK3-209ENST00000594948 CXCR4P61073 352 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 GTF2H2Q13888 395 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 NKG7Q16617 165 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 IMPG1Q17R60 797 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 RUNDC3AQ59EK9 446 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 FBXO48Q5FWF7 155 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 GTF2H2CQ6P1K8 395 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 ENPP6Q6UWR7 440 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 GOLGA7Q7Z5G4 137 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 RBM23Q86U06 439 aaKnown RBP13.02□□□□□ -0.32
VRK3-209ENST00000594948 SERINC5Q86VE9 423 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 PLPP6Q8IY26 295 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 MICU2Q8IYU8 434 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 MDGA1Q8NFP4 955 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 OR4F6Q8NGB9 312 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 EEF1AKMT1Q8WVE0 214 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 FIG4Q92562 907 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 GTF2H4Q92759 462 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 FAM162AQ96A26 154 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 DCAF13Q9NV06 445 aaKnown RBP13.02□□□□□ -0.32
VRK3-209ENST00000594948 MARCH2Q9P0N8 246 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.32
VRK3-209ENST00000594948 DAPK2Q9UIK4 370 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 ASB1Q9Y576 335 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 ORC6Q9Y5N6 252 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 PLXNA4Q9HCM2 1894 aa13.02□□□□□ -0.32
VRK3-209ENST00000594948 TRBV5-3A0A0A0MS03 114 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 KRBA1A5PL33 1030 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 INSIG1O15503 277 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 RECQL5O94762 991 aaPredicted RBP13.02□□□□□ -0.33
VRK3-209ENST00000594948 ITGB1P05556 798 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 JUNDP17535 347 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 PIGAP37287 484 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 SERPINB10P48595 397 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 HNRNPFP52597 415 aaKnown RBP13.02□□□□□ -0.33
VRK3-209ENST00000594948 DGKQP52824 942 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 OXCT1P55809 520 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 CYP2A13Q16696 494 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 METTL2BQ6P1Q9 378 aaKnown RBP13.02□□□□□ -0.33
VRK3-209ENST00000594948 CALHM3Q86XJ0 350 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 DCP2Q8IU60 420 aaKnown RBP13.02□□□□□ -0.33
VRK3-209ENST00000594948 FAM86B1Q8N7N1 296 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 FBXO30Q8TB52 745 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 FAR1Q8WVX9 515 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 TAMM41Q96BW9 452 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms