RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NDUFS1P28331 727 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 PDHA2P29803 388 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 CXCR5P32302 372 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 NSG1P42857 185 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 KCNJ1P48048 391 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 PREPP48147 710 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 KRT33BQ14525 404 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 IL11RAQ14626 422 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 KCNAB1Q14722 419 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 KCTD19Q17RG1 926 aaPredicted RBP13.52□□□□□ -0.25
APOC1-208ENST00000592535 AFTPHQ6ULP2 937 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 CERS6Q6ZMG9 384 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 EXD3Q8N9H8 876 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 SIDT2Q8NBJ9 832 aaKnown RBP13.52□□□□□ -0.25
APOC1-208ENST00000592535 OR4E2Q8NGC2 313 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 MAIP1Q8WWC4 291 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 MED8Q96G25 268 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 SLC41A2Q96JW4 573 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 FERD3LQ96RJ6 166 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 CD180Q99467 661 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 GPN2Q9H9Y4 310 aaPredicted RBP13.52□□□□□ -0.25
APOC1-208ENST00000592535 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 TCAF1Q9Y4C2 921 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 HEBP2Q9Y5Z4 205 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 FASNP49327 2511 aaKnown RBP13.52□□□□□ -0.25
APOC1-208ENST00000592535 UBA6A0AVT1 1052 aaPredicted RBP13.51□□□□□ -0.25
APOC1-208ENST00000592535 TLCD2A6NGC4 264 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 IFRD1O00458 451 aaPredicted RBP13.51□□□□□ -0.25
APOC1-208ENST00000592535 NRDCO43847 1150 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 KIAA0754O94854 1291 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 EBLN1P0CF75 366 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 FGF5P12034 268 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 FOLR1P15328 257 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 POLR2CP19387 275 aaPredicted RBP13.51□□□□□ -0.25
APOC1-208ENST00000592535 KPNA2P52292 529 aaKnown RBP13.51□□□□□ -0.25
APOC1-208ENST00000592535 BASP1P80723 227 aaKnown RBP13.51□□□□□ -0.25
APOC1-208ENST00000592535 ACVR1Q04771 509 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 ABHD18Q0P651 414 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 RPA4Q13156 261 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 LAMB3Q13751 1172 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 MAP7Q14244 749 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 SEMA3AQ14563 771 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 TBR1Q16650 682 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 ARMC6Q6NXE6 501 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 FBXO38Q6PIJ6 1188 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 PACS1Q6VY07 963 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 ZNF534Q76KX8 674 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 RASGRP3Q8IV61 690 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 ESX1Q8N693 406 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 PHC3Q8NDX5 983 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 ACVR1CQ8NER5 493 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.51□□□□□ -0.25
APOC1-208ENST00000592535 KIAA1143Q96AT1 154 aaPredicted RBP13.51□□□□□ -0.25
APOC1-208ENST00000592535 PPM1MQ96MI6 270 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 NRTNQ99748 197 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 TRIT1Q9H3H1 467 aaKnown RBP13.51□□□□□ -0.25
APOC1-208ENST00000592535 GRPEL1Q9HAV7 217 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 EIF2B3Q9NR50 452 aaKnown RBP13.51□□□□□ -0.25
APOC1-208ENST00000592535 IL17BQ9UHF5 180 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 RIMKLBQ9ULI2 386 aa13.51□□□□□ -0.25
APOC1-208ENST00000592535 QSOX1O00391 747 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 OR1I1O60431 355 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 SPAG6O75602 509 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 TIAF1O95411 115 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 FTH1P02794 183 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 GSTM1P09488 218 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 STAT5AP42229 794 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 CD151P48509 253 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 ARL4DP49703 201 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 SESN2P58004 480 aaPredicted RBP13.5□□□□□ -0.25
APOC1-208ENST00000592535 GSTM4Q03013 218 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 TUBB3Q13509 450 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 BOP1Q14137 746 aaKnown RBP13.5□□□□□ -0.25
APOC1-208ENST00000592535 BRD3Q15059 726 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
APOC1-208ENST00000592535 ZNF449Q6P9G9 518 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 C6orf15Q6UXA7 325 aaPredicted RBP13.5□□□□□ -0.25
APOC1-208ENST00000592535 NAPRTQ6XQN6 538 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 PPP1R3BQ86XI6 285 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 KMT5CQ86Y97 462 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 PRELID2Q8N945 189 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 GALNT6Q8NCL4 622 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 PPHLN1Q8NEY8 458 aaKnown RBP13.5□□□□□ -0.25
APOC1-208ENST00000592535 OR52E1Q8NGJ3 308 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 OR6P1Q8NGX9 317 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 OR4L1Q8NH43 312 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 LCN9Q8WX39 176 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 ELMO1Q92556 727 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 TFGQ92734 400 aaPredicted RBP13.5□□□□□ -0.25
APOC1-208ENST00000592535 SLC45A3Q96JT2 553 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 ARHGAP9Q9BRR9 750 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 SRMSQ9H3Y6 488 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 PDE7BQ9NP56 450 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 LNPEPQ9UIQ6 1025 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 POMT2Q9UKY4 750 aa13.5□□□□□ -0.25
APOC1-208ENST00000592535 SMG1Q96Q15 3661 aaKnown RBP13.5□□□□□ -0.25
APOC1-208ENST00000592535 ZNF891A8MT65 544 aaPredicted RBP13.49□□□□□ -0.25
APOC1-208ENST00000592535 BTN3A3O00478 584 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 LIN7AO14910 233 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms