RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 COMTP21964 271 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 DNAJA1P31689 397 aaKnown RBP7.22□□□□□ -1.25
VAT1-209ENST00000592388 CD68P34810 354 aaPredicted RBP7.22□□□□□ -1.25
VAT1-209ENST00000592388 SLC19A1P41440 591 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 VAV2P52735 878 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 EPHA4P54764 986 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 RRADP55042 308 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 DCDC1P59894 354 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 WASHC5Q12768 1159 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 ATP1A4Q13733 1029 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 KIR2DS5Q14953 304 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 PDK1Q15118 436 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 PRKD1Q15139 912 aaPredicted RBP7.22□□□□□ -1.25
VAT1-209ENST00000592388 CDSNQ15517 529 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 ATP13A5Q4VNC0 1218 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 KAZNQ674X7 775 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 IGFL3Q6UXB1 125 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 RPTNQ6XPR3 784 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 MED25Q71SY5 747 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 TMC3Q7Z5M5 1100 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 LRRTM4Q86VH4 590 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 SLC25A41Q8N5S1 370 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 TRAM1L1Q8N609 369 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 RNF214Q8ND24 703 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 OR8K1Q8NGG5 319 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 NUDT8Q8WV74 236 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 MR1Q95460 341 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 MTFMTQ96DP5 389 aaKnown RBP7.22□□□□□ -1.25
VAT1-209ENST00000592388 C9orf72Q96LT7 481 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 TGM7Q96PF1 710 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 FOXC2Q99958 501 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 ZSCAN5AQ9BUG6 496 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 ADGRE3Q9BY15 652 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 SLC25A51Q9H1U9 297 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 CXXC4Q9H2H0 198 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 RMI1Q9H9A7 625 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 NHEJ1Q9H9Q4 299 aaPredicted RBP7.22□□□□□ -1.25
VAT1-209ENST00000592388 GLOD4Q9HC38 313 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 TRIM39Q9HCM9 518 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 NFKBIL1Q9UBC1 381 aaPredicted RBP7.22□□□□□ -1.25
VAT1-209ENST00000592388 SNX7Q9UNH6 387 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 WDR37Q9Y2I8 494 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 CNTRLQ7Z7A1 2325 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 DOCK10Q96BY6 2186 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 PCM1Q15154 2024 aa7.22□□□□□ -1.25
VAT1-209ENST00000592388 AKAP6Q13023 2319 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 VPS13CQ709C8 3753 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 RGSL1A5PLK6 1076 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 ZNF487B1APH4 448 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 CHUKO15111 745 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 SPOPO43791 374 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 KIF1CO43896 1103 aaKnown RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 CST8O60676 142 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 RASSF9O75901 435 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 NDST3O95803 873 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 VIPP01282 170 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 C9P02748 559 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 ALPPP05187 535 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 ANKRD34CP0C6C1 535 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 SLC2A4P14672 509 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 ZNF7P17097 686 aaPredicted RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 PBLDP30039 288 aaPredicted RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 CDKN2BP42772 138 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 CTSCP53634 463 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 CSNK1G2P78368 415 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 OLIG2Q13516 323 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 GPR18Q14330 331 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 PTPRCAPQ14761 206 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.21□□□□□ -1.26
VAT1-209ENST00000592388 TEX44Q53QW1 395 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 SIRPB2Q5JXA9 342 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 PWWP2BQ6NUJ5 590 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 XKRXQ6PP77 449 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 KDELC1Q6UW63 502 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 FAM151BQ6UXP7 276 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 FAM83HQ6ZRV2 1179 aaPredicted RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 FAM92BQ6ZTR7 304 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 TMEM26Q6ZUK4 368 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 C11orf96Q7Z7L8 435 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 BIVMQ86UB2 503 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 PLXDC1Q8IUK5 500 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 TRAPPC5Q8IUR0 188 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 VSTM4Q8IW00 320 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 TRIM48Q8IWZ4 208 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 RAVER1Q8IY67 606 aaKnown RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 TTC30BQ8N4P2 665 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 ZBTB2Q8N680 514 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 IPMKQ8NFU5 416 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 TM9SF4Q92544 642 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 OXNAD1Q96HP4 312 aaPredicted RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 SPOCK3Q9BQ16 436 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 TIMM29Q9BSF4 260 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 MAK16Q9BXY0 300 aaKnown RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 ZNF552Q9H707 407 aaPredicted RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 C10orf88Q9H8K7 445 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 MAGEE1Q9HCI5 957 aa7.21□□□□□ -1.26
VAT1-209ENST00000592388 CCM2LQ9NUG4 571 aaPredicted RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 NOVA2Q9UNW9 492 aaKnown RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 MAP1AP78559 2803 aaPredicted RBP7.21□□□□□ -1.26
VAT1-209ENST00000592388 OR2AG2A6NM03 316 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms