RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 XKR5Q6UX68 686 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 CYS1Q717R9 158 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 ZNF438Q7Z4V0 828 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 SPRED1Q7Z699 444 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 STRA8Q7Z7C7 330 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 PDZD3Q86UT5 571 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 SLC26A11Q86WA9 606 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 CTAGE3PQ8IX95 158 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 AHCYL2Q96HN2 611 aaKnown RBP20.3■□□□□ 0.84
DNMT1-227ENST00000592342 FERD3LQ96RJ6 166 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 LRRN3Q9H3W5 708 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 COLEC10Q9Y6Z7 277 aa20.3■□□□□ 0.84
DNMT1-227ENST00000592342 DMXL1Q9Y485 3027 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 DNAH14Q0VDD8 3507 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 ABCG1P45844 678 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 MAPK9P45984 424 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 OR1D5P58170 312 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 CCL7P80098 99 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 SPIDRQ14159 915 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 TTLL9Q3SXZ7 439 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 PLEKHS1Q5SXH7 462 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 DUS1LQ6P1R4 473 aaKnown RBP20.29■□□□□ 0.84
DNMT1-227ENST00000592342 ZNF549Q6P9A3 640 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 TMEM26Q6ZUK4 368 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 RELL1Q8IUW5 271 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 CHCHD4Q8N4Q1 142 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 ZBTB2Q8N680 514 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 GPATCH11Q8N954 259 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 OR10G6Q8NH81 332 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 FBF1Q8TES7 1133 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 SKA2Q8WVK7 121 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-227ENST00000592342 TFGQ92734 400 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-227ENST00000592342 KCNJ9Q92806 393 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 GFM1Q96RP9 751 aaKnown RBP20.29■□□□□ 0.84
DNMT1-227ENST00000592342 NDNQ99608 321 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 AARSD1Q9BTE6 412 aaKnown RBP20.29■□□□□ 0.84
DNMT1-227ENST00000592342 NINJ2Q9NZG7 142 aa20.29■□□□□ 0.84
DNMT1-227ENST00000592342 GPC4O75487 556 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 NDUFS1P28331 727 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 GABRB3P28472 473 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 INSM1Q01101 510 aaPredicted RBP20.28■□□□□ 0.84
DNMT1-227ENST00000592342 NR1D2Q14995 579 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 PLCL1Q15111 1095 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 HES3Q5TGS1 186 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 UGT3A1Q6NUS8 523 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 SLC22A15Q8IZD6 547 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 GALNT15Q8N3T1 639 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 UBXN4Q92575 508 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 ATXN7L3BQ96GX2 97 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 CDC42EP4Q9H3Q1 356 aaKnown RBP20.28■□□□□ 0.84
DNMT1-227ENST00000592342 SLC40A1Q9NP59 571 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 SMYD2Q9NRG4 433 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 CORO1CQ9ULV4 474 aaPredicted RBP20.28■□□□□ 0.84
DNMT1-227ENST00000592342 ASF1AQ9Y294 204 aa20.28■□□□□ 0.84
DNMT1-227ENST00000592342 GOLGA4Q13439 2230 aaKnown RBP20.28■□□□□ 0.84
DNMT1-227ENST00000592342 BPTFQ12830 3046 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 PRAMEF33A0A0G2JMD5 474 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 LILRA5A6NI73 299 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 FAM159BA6NKW6 160 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 B4GAT1O43505 415 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 PIAS1O75925 651 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 EPHA4P54764 986 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 GPLD1P80108 840 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 GPR18Q14330 331 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 KBTBD12Q3ZCT8 623 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 MAP9Q49MG5 647 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 ERMP1Q7Z2K6 904 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 SIDT2Q8NBJ9 832 aaKnown RBP20.27■□□□□ 0.84
DNMT1-227ENST00000592342 GPR21Q99679 349 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 TBC1D10AQ9BXI6 508 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 MVB12BQ9H7P6 319 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 UCK1Q9HA47 277 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 LATS2Q9NRM7 1088 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 TAS2R13Q9NYV9 303 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 TRMT6Q9UJA5 497 aaKnown RBP20.27■□□□□ 0.84
DNMT1-227ENST00000592342 PSAT1Q9Y617 370 aa20.27■□□□□ 0.84
DNMT1-227ENST00000592342 IGHV1OR21-1A0A087WYE8 117 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 A0A1W2PQM1 296 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 DUX1O43812 170 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 TCEA3O75764 348 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 SLCO2B1O94956 709 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 ACSL3O95573 720 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 MT-CO3P00414 261 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 JUPP14923 745 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 AMD1P17707 334 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 CLDN6P56747 220 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 ILF2Q12905 390 aaKnown RBP20.26■□□□□ 0.83
DNMT1-227ENST00000592342 ABRQ12979 859 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 RBM20Q5T481 1227 aaKnown RBP20.26■□□□□ 0.83
DNMT1-227ENST00000592342 FAM45BPQ6NSW5 357 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 RBM44Q6ZP01 1051 aaKnown RBP20.26■□□□□ 0.83
DNMT1-227ENST00000592342 RAB44Q7Z6P3 723 aaPredicted RBP20.26■□□□□ 0.83
DNMT1-227ENST00000592342 TMPRSS12Q86WS5 348 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 VRK3Q8IV63 474 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 GSPT2Q8IYD1 628 aaKnown RBP20.26■□□□□ 0.83
DNMT1-227ENST00000592342 PPM1NQ8N819 430 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 EIF1ADQ8N9N8 165 aaKnown RBP20.26■□□□□ 0.83
DNMT1-227ENST00000592342 PHC3Q8NDX5 983 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 CFAP61Q8NHU2 1237 aa20.26■□□□□ 0.83
DNMT1-227ENST00000592342 FAM45AQ8TCE6 357 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms