RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 TSGA13Q96PP4 275 aa9.6□□□□□ -0.87
RETREG3-211ENST00000591547 FAM118BQ9BPY3 351 aa9.6□□□□□ -0.87
RETREG3-211ENST00000591547 SPATA16Q9BXB7 569 aa9.6□□□□□ -0.87
RETREG3-211ENST00000591547 PCDH9Q9HC56 1237 aa9.6□□□□□ -0.87
RETREG3-211ENST00000591547 ZBTB20Q9HC78 741 aaPredicted RBP9.6□□□□□ -0.87
RETREG3-211ENST00000591547 TRIM39Q9HCM9 518 aa9.6□□□□□ -0.87
RETREG3-211ENST00000591547 TMPRSS11EQ9UL52 423 aa9.6□□□□□ -0.87
RETREG3-211ENST00000591547 PSMD13Q9UNM6 376 aa9.6□□□□□ -0.87
RETREG3-211ENST00000591547 R3HDM2Q9Y2K5 976 aaKnown RBP9.6□□□□□ -0.87
RETREG3-211ENST00000591547 MDC1Q14676 2089 aaKnown RBP9.6□□□□□ -0.87
RETREG3-211ENST00000591547 ZFHX3Q15911 3703 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 CTAGE9A4FU28 777 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 HACD1B0YJ81 288 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 H7C0C1 242 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 KCNK1O00180 336 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 PGRMC1O00264 195 aaKnown RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 CES2O00748 559 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 CHUKO15111 745 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 CPNE3O75131 537 aaKnown RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 FGGP02679 453 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 CAPN1P07384 714 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 RBP3P10745 1247 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 CCNCP24863 283 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 ATP5OP48047 213 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 FOXL2P58012 376 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 EIF3EP60228 445 aaKnown RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 ETF1P62495 437 aaKnown RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 ABRQ12979 859 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 XRCC4Q13426 336 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 SIX1Q15475 284 aaPredicted RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 ZRANB3Q5FWF4 1079 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 PLEKHS1Q5SXH7 462 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 SP5Q6BEB4 398 aaPredicted RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 DUS1LQ6P1R4 473 aaKnown RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 ABRAXAS1Q6UWZ7 409 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 SYT10Q6XYQ8 523 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 B4GALNT4Q76KP1 1039 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 LRRTM4Q86VH4 590 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 TMEM126BQ8IUX1 230 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 RASGEF1CQ8N431 466 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 CCNYQ8ND76 341 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 SLC35B2Q8TB61 432 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 COG1Q8WTW3 980 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 TFB1MQ8WVM0 346 aaKnown RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 ATG4AQ8WYN0 398 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 ZNF501Q96CX3 271 aaPredicted RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 PBKQ96KB5 322 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 CEP41Q9BYV8 373 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 POLR1EQ9GZS1 481 aaKnown RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 WASH6PQ9NQA3 447 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 POT1Q9NUX5 634 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 RBM22Q9NW64 420 aaKnown RBP eCLIP9.59□□□□□ -0.874e-8■■■■□ 23.7
RETREG3-211ENST00000591547 GPR83Q9NYM4 423 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 SMARCAL1Q9NZC9 954 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 PKD2L2Q9NZM6 624 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 SEMA5BQ9P283 1151 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 EPHA6Q9UF33 1036 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 TCFL5Q9UL49 500 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 SNX7Q9UNH6 387 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 SHOC2Q9UQ13 582 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 CFAP20Q9Y6A4 193 aaKnown RBP9.59□□□□□ -0.87
RETREG3-211ENST00000591547 SPTBP11277 2137 aa9.59□□□□□ -0.87
RETREG3-211ENST00000591547 POLQO75417 2590 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 MEN1O00255 615 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 KMOO15229 486 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 MATN3O15232 486 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 LRRTM2O43300 516 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 MMP2P08253 660 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 PTPN3P26045 913 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 CD86P42081 329 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 GLRBP48167 497 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 ARL4DP49703 201 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 PDE1BQ01064 536 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 ACY1Q03154 408 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 LONRF2Q1L5Z9 754 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 PTCHD3Q3KNS1 767 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 CRB2Q5IJ48 1285 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 IZUMO3Q5VZ72 239 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 ZNF517Q6ZMY9 492 aaPredicted RBP9.58□□□□□ -0.88
RETREG3-211ENST00000591547 FAM83HQ6ZRV2 1179 aaPredicted RBP9.58□□□□□ -0.88
RETREG3-211ENST00000591547 C11orf96Q7Z7L8 435 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 MCEMP1Q8IX19 187 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 DSELQ8IZU8 1212 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 IQCKQ8N0W5 287 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 GLIS1Q8NBF1 620 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 AVL9Q8NBF6 648 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 NAT14Q8WUY8 206 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 MAIP1Q8WWC4 291 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 SEC14L1Q92503 715 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 UBXN4Q92575 508 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 GLYATL1Q969I3 302 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 MS4A14Q96JA4 679 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 LYSMD1Q96S90 227 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 SMAD5Q99717 465 aaKnown RBP9.58□□□□□ -0.88
RETREG3-211ENST00000591547 NRTNQ99748 197 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 FRMD8P1Q9BZ68 369 aaPredicted RBP9.58□□□□□ -0.88
RETREG3-211ENST00000591547 RAB33BQ9H082 229 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 TTC7AQ9ULT0 858 aaPredicted RBP9.58□□□□□ -0.88
RETREG3-211ENST00000591547 PCDHGB7Q9Y5F8 929 aa9.58□□□□□ -0.88
RETREG3-211ENST00000591547 CSAG2Q9Y5P2 127 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms