RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 PALM2Q8IXS6 379 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 SLC35F3Q8IY50 421 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 KYQ8NBH2 561 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 GSDMBQ8TAX9 411 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 GRAMD1AQ96CP6 724 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 ZNF514Q96K75 400 aaPredicted RBP21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 FMO2Q99518 471 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 TTC1Q99614 292 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 DPEP2Q9H4A9 486 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 LRRC4CQ9HCJ2 640 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 PPANQ9NQ55 473 aaKnown RBP21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 SMYD2Q9NRG4 433 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 MOCS1Q9NZB8 636 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 FBXO5Q9UKT4 447 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 SATB2Q9UPW6 733 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 CRYL1Q9Y2S2 319 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 MAST4O15021 2626 aa21.05■□□□□ 0.96
R3HDM4-206ENST00000590454 TRBV23OR9-2A0A075B6M9 112 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 UBA6A0AVT1 1052 aaPredicted RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 A6NCN8 305 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 PRMT5O14744 637 aaPredicted RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 NOBOXO60393 691 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 HAUS5O94927 633 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 AP2A2O94973 939 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 FAM153BP0C7A2 387 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 GABRB3P28472 473 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 FMO4P31512 558 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 EIF3BP55884 814 aaKnown RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 FRG1Q14331 258 aaKnown RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 SEPT7Q16181 437 aaKnown RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 FAM153CQ494X1 144 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 C3orf38Q5JPI3 329 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 KRT222Q8N1A0 295 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 SDR16C5Q8N3Y7 309 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 C2CD4AQ8NCU7 369 aaPredicted RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 IFI44Q8TCB0 444 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 LINC00615Q96LM1 132 aaPredicted RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 SLC46A1Q96NT5 459 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 BIRC8Q96P09 236 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 TCF12Q99081 682 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 FAM167BQ9BTA0 163 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 FAM129AQ9BZQ8 928 aa21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 RRAGDQ9NQL2 400 aaPredicted RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 SCHIP1Q9P0W5 487 aaPredicted RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 MTRF1LQ9UGC7 380 aaKnown RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 DNMT3AQ9Y6K1 912 aaPredicted RBP21.04■□□□□ 0.96
R3HDM4-206ENST00000590454 MGAT4DA6NG13 374 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 C1QAP02745 245 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 RPL10P27635 214 aaKnown RBP21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 CLCNKAP51800 687 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 MAZP56270 477 aaKnown RBP21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 KYNUQ16719 465 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 KIAA1614Q5VZ46 1190 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 ZCCHC8Q6NZY4 707 aaKnown RBP21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 ZNF549Q6P9A3 640 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 CNSTQ6PJW8 725 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 OGFOD3Q6PK18 319 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 C3orf62Q6ZUJ4 267 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 CNTN4Q8IWV2 1026 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 NAGSQ8N159 534 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 OR2L2Q8NH16 312 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 ZDHHC1Q8WTX9 485 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 CCM2Q9BSQ5 444 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 NINJ2Q9NZG7 142 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 WDR37Q9Y2I8 494 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 ATMQ13315 3056 aa21.03■□□□□ 0.96
R3HDM4-206ENST00000590454 TCRBV9S1A1TA0A576 114 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 CXorf49A8MYA2 514 aaPredicted RBP21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 BRAFP15056 766 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 RPS3P23396 243 aaKnown RBP eCLIP21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 PPARGP37231 505 aaPredicted RBP21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 CSRP3P50461 194 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 DMPKQ09013 629 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 MGAT5Q09328 741 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 CCDC81Q6ZN84 652 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 CFAP206Q8IYR0 622 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 GPR156Q8NFN8 814 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 CALML6Q8TD86 181 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 SCG3Q8WXD2 468 aaKnown RBP21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 INTS10Q9NVR2 710 aaKnown RBP21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 GALPQ9UBC7 116 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 PSMD13Q9UNM6 376 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 PCDHGA8Q9Y5G5 932 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 PSAT1Q9Y617 370 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 MYO18BQ8IUG5 2567 aa21.02■□□□□ 0.96
R3HDM4-206ENST00000590454 NIPSNAP2O75323 286 aa21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 OR56A5P0C7T3 313 aa21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 BRD3Q15059 726 aa21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 RNF187Q5TA31 235 aaPredicted RBP21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 METRNLQ641Q3 311 aa21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 PTRHD1Q6GMV3 140 aaKnown RBP21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 PRICKLE2Q7Z3G6 844 aa21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 LMNTD2Q8IXW0 634 aa21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 ARL10Q8N8L6 244 aa21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 FAM136AQ96C01 138 aa21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 NCKIPSDQ9NZQ3 722 aa21.01■□□□□ 0.95
R3HDM4-206ENST00000590454 PRAMEF33A0A0G2JMD5 474 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 CASC3O15234 703 aaKnown RBP21■□□□□ 0.95
R3HDM4-206ENST00000590454 AHSGP02765 367 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 VCLP18206 1134 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms