RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ARHGAP25P42331 645 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 SLC1A1P43005 524 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 CLCNKAP51800 687 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 GSCP56915 257 aaPredicted RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 YBEYP58557 167 aaPredicted RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 YBX1P67809 324 aaKnown RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 ATP11AP98196 1134 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 TFF3Q07654 80 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 AIMP2Q13155 320 aaKnown RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 PIGHQ14442 188 aaPredicted RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 SSPNQ14714 243 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 SEPT7Q16181 437 aaKnown RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.92□□□□□ -1.46
VPS25-204ENST00000589577 ASTE1Q2TB18 679 aaPredicted RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 PARP15Q460N3 678 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 C2CD6Q53TS8 623 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 AGAP7PQ5VUJ5 663 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 PRAMEF13Q5VWM6 474 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 FBXO38Q6PIJ6 1188 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 ARCQ7LC44 396 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 DAAM2Q86T65 1068 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 PHYKPLQ8IUZ5 450 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 TMEM139Q8IV31 216 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 UMODL1-AS1Q8N2C9 162 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 RNF10Q8N5U6 811 aaKnown RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 LZTR1Q8N653 840 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 EMC1Q8N766 993 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 TRIM58Q8NG06 486 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 OR1N1Q8NGS0 311 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 GPR150Q8NGU9 434 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 OR8K5Q8NH50 307 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 OR1L3Q8NH93 324 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 EXD1Q8NHP7 514 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 MAGEB10Q96LZ2 347 aaPredicted RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 ZNF830Q96NB3 372 aaPredicted RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 AGAP4Q96P64 663 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 ALPK1Q96QP1 1244 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 WDR24Q96S15 920 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 SYT11Q9BT88 431 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 NDC1Q9BTX1 674 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 RIOK2Q9BVS4 552 aaKnown RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 TLR10Q9BXR5 811 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 THAP2Q9H0W7 228 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 OSGEPL1Q9H4B0 414 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 LRRC19Q9H756 370 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 SLC6A20Q9NP91 592 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 ATP13A2Q9NQ11 1180 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 LZTFL1Q9NQ48 299 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 KLC4Q9NSK0 619 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 POT1Q9NUX5 634 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 SEC14L3Q9UDX4 400 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 FBXL4Q9UKA2 621 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 ZKSCAN5Q9Y2L8 839 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 ZNF835Q9Y2P0 537 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 MEMO1Q9Y316 297 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 PTRH2Q9Y3E5 179 aaKnown RBP5.92□□□□□ -1.46
VPS25-204ENST00000589577 PCDHGC4Q9Y5F7 938 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 TGP01266 2768 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 CHD3Q12873 2000 aaKnown RBP5.91□□□□□ -1.46
VPS25-204ENST00000589577 BTNL10A8MVZ5 291 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 AGPSO00116 658 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 PEX12O00623 359 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 ADAM10O14672 748 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 PJA2O43164 708 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 PROM1O43490 865 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 PRPSAP2O60256 369 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 NUAK1O60285 661 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 KLHL18O94889 574 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 IGHEP01854 428 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 TUBB4AP04350 444 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 EPHB2P29323 1055 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 ADSLP30566 484 aaPredicted RBP5.91□□□□□ -1.46
VPS25-204ENST00000589577 FOLR3P41439 243 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 PTPN9P43378 593 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 AP1S1P61966 158 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 PTSQ03393 145 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 TRAF2Q12933 501 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 MAMLD1Q13495 774 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 PLCL1Q15111 1095 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 INAQ16352 499 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 C15orf59Q2T9L4 293 aaPredicted RBP5.91□□□□□ -1.46
VPS25-204ENST00000589577 DNTTIP2Q5QJE6 756 aaKnown RBP5.91□□□□□ -1.46
VPS25-204ENST00000589577 ZNF648Q5T619 568 aaPredicted RBP5.91□□□□□ -1.46
VPS25-204ENST00000589577 LRRC66Q68CR7 880 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 ABRAXAS1Q6UWZ7 409 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 Q6ZPB1 254 aaPredicted RBP5.91□□□□□ -1.46
VPS25-204ENST00000589577 ARHGAP36Q6ZRI8 547 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 LINC00696Q6ZRV3 163 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 PEX26Q7Z412 305 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 TRIM48Q8IWZ4 208 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 DMRTC2Q8IXT2 367 aaPredicted RBP5.91□□□□□ -1.46
VPS25-204ENST00000589577 TTC30BQ8N4P2 665 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 UBL4BQ8N7F7 174 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 OR2Y1Q8NGV0 311 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 SLC35G2Q8TBE7 412 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 SCRN2Q96FV2 425 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 CNPY3Q9BT09 278 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 DHRS4Q9BTZ2 278 aa5.91□□□□□ -1.46
VPS25-204ENST00000589577 ACTR5Q9H9F9 607 aaPredicted RBP5.91□□□□□ -1.46
VPS25-204ENST00000589577 TRMT1Q9NXH9 659 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms