RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CXorf40BQ96DE9 158 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 VPS39Q96JC1 886 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 CAMK1GQ96NX5 476 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-220ENST00000588917 SARS2Q9NP81 518 aaKnown RBP19.16■□□□□ 0.66
CIRBP-220ENST00000588917 DHRS7Q9Y394 339 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 PSAT1Q9Y617 370 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 COLEC10Q9Y6Z7 277 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 GIPC1O14908 333 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 SLCO2B1O94956 709 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 VIPP01282 170 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 CBSLP0DN79 551 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 ACP1P24666 158 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 NDUFS1P28331 727 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 CBSP35520 551 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 FASLGP48023 281 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 SLC12A2P55011 1212 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 ILKQ13418 452 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 SLC29A2Q14542 456 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 BRD3Q15059 726 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 LGSNQ5TDP6 509 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 HECTD2Q5U5R9 776 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 LRRC8EQ6NSJ5 796 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 TRIM48Q8IWZ4 208 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 ZBTB2Q8N680 514 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 GPATCH11Q8N954 259 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 RBBP8Q99708 897 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 WWP1Q9H0M0 922 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 TRMT6Q9UJA5 497 aaKnown RBP19.15■□□□□ 0.66
CIRBP-220ENST00000588917 PSMD13Q9UNM6 376 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 KNL1Q8NG31 2342 aa19.15■□□□□ 0.66
CIRBP-220ENST00000588917 ZFHX4Q86UP3 3567 aa19.14■□□□□ 0.66
CIRBP-220ENST00000588917 TRBV23OR9-2A0A075B6M9 112 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 RHPN2P1A8MT19 583 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 EIF3FO00303 357 aaPredicted RBP19.14■□□□□ 0.65
CIRBP-220ENST00000588917 EML2O95834 649 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 GP1BAP07359 652 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 BRAFP15056 766 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 ATP5DP30049 168 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 MSH2P43246 934 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 MAPK9P45984 424 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 CLCN7P51798 805 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 POU4F1Q01851 419 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 KRT33BQ14525 404 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 CLCA4Q14CN2 919 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 RPE65Q16518 533 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 SLC22A15Q8IZD6 547 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 DEFB124Q8NES8 71 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 SLC37A2Q8TED4 501 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 UBLCP1Q8WVY7 318 aaPredicted RBP19.14■□□□□ 0.65
CIRBP-220ENST00000588917 CAVIN3Q969G5 261 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 TSPAN17Q96FV3 270 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 ELMO2Q96JJ3 720 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 MCMBPQ9BTE3 642 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 OR52A5Q9H2C5 316 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 POT1Q9NUX5 634 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 SLC17A6Q9P2U8 582 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 LRIT1Q9P2V4 623 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 CPNE7Q9UBL6 633 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 FETUBQ9UGM5 382 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 WDR37Q9Y2I8 494 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 CHD6Q8TD26 2715 aa19.14■□□□□ 0.65
CIRBP-220ENST00000588917 CFAP47Q6ZTR5 3102 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 FAM95CA0A1B0GW59 222 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 CPED1A4D0V7 1026 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 ERLIN1O75477 346 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 RPN2P04844 631 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 INHBAP08476 426 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 ENO3P13929 434 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-220ENST00000588917 PDHA2P29803 388 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 GPR3P46089 330 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 RGS4P49798 205 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 SERPINB9P50453 376 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 E2F1Q01094 437 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 HHEXQ03014 270 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 PDAP1Q13442 181 aaKnown RBP19.13■□□□□ 0.65
CIRBP-220ENST00000588917 TTC23LQ6PF05 361 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 NEK10Q6ZWH5 1172 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 TAOK1Q7L7X3 1001 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 PDZD3Q86UT5 571 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 LILRA3Q8N6C8 439 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-220ENST00000588917 KYQ8NBH2 561 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 LKAAEAR1Q8TD35 194 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 AENQ8WTP8 325 aaKnown RBP19.13■□□□□ 0.65
CIRBP-220ENST00000588917 TFGQ92734 400 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-220ENST00000588917 C12orf66Q96MD2 445 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 FOPNLQ96NB1 174 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 INSM2Q96T92 566 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-220ENST00000588917 NDNQ99608 321 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 GPR21Q99679 349 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 PPCSQ9HAB8 311 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 POPDC3Q9HBV1 291 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 SYTL2Q9HCH5 934 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 ZNF624Q9P2J8 865 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-220ENST00000588917 PCDHGA1Q9Y5H4 931 aa19.13■□□□□ 0.65
CIRBP-220ENST00000588917 TDRD6O60522 2096 aaKnown RBP19.13■□□□□ 0.65
CIRBP-220ENST00000588917 COL5A1P20908 1838 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-220ENST00000588917 EXOC1LA0A1B0GW35 172 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 KDM1AO60341 852 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 PIAS1O75925 651 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms