RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 MRFAP1Q9Y605 127 aa15.38■□□□□ 0.05
NCLN-203ENST00000587740 SHANK1Q9Y566 2161 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 CCDC78A2IDD5 438 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 FAM187AA6NFU0 413 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 MROH6A6NGR9 719 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 GOLGA8MH3BSY2 632 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 UGT1A9O60656 530 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 SRP72O76094 671 aaKnown RBP15.37■□□□□ 0.05
NCLN-203ENST00000587740 PRAMEF1O95521 474 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 RNF224P0DH78 156 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 MLNP12872 115 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 UGT1A6P19224 532 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 UGT1A1P22309 533 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 UGT1A4P22310 534 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 MGAT1P26572 445 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 MC1RQ01726 317 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 PEX6Q13608 980 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 TSTD2Q5T7W7 516 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 RNASEH2BQ5TBB1 312 aaKnown RBP15.37■□□□□ 0.05
NCLN-203ENST00000587740 IZUMO3Q5VZ72 239 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 HOOK3Q86VS8 718 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 TEX19Q8NA77 164 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 GDAP1Q8TB36 358 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 NCSTNQ92542 709 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 CDKN2AIPNLQ96HQ2 116 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 ZPBPQ9BS86 351 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 ZMYND15Q9H091 742 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 TRIT1Q9H3H1 467 aaKnown RBP15.37■□□□□ 0.05
NCLN-203ENST00000587740 ASB8Q9H765 288 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 UGT1A7Q9HAW7 530 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 UGT1A10Q9HAW8 530 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 UGT1A8Q9HAW9 530 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 TRIM39Q9HCM9 518 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 ARFGAP3Q9NP61 516 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 VPS18Q9P253 973 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 RIMKLBQ9ULI2 386 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 OAS3Q9Y6K5 1087 aaKnown RBP15.37■□□□□ 0.05
NCLN-203ENST00000587740 SLC30A1Q9Y6M5 507 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 RPS6KL1Q9Y6S9 549 aa15.37■□□□□ 0.05
NCLN-203ENST00000587740 HIVEP3Q5T1R4 2406 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 CELSR2Q9HCU4 2923 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 EFCAB8A8MWE9 144 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 H7C0S8 307 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 GAPDHSO14556 408 aaPredicted RBP15.36■□□□□ 0.05
NCLN-203ENST00000587740 NDC80O14777 642 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 PDGFAP04085 211 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 ITGALP20701 1170 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 IVDP26440 423 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 MC4RP32245 332 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 CRADDP78560 199 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 XIAPP98170 497 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 CRYBG3Q68DQ2 2970 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 CAPRIN2Q6IMN6 1127 aaKnown RBP15.36■□□□□ 0.05
NCLN-203ENST00000587740 MARK2Q7KZI7 788 aaKnown RBP15.36■□□□□ 0.05
NCLN-203ENST00000587740 TMEM135Q86UB9 458 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 CAND1Q86VP6 1230 aaKnown RBP15.36■□□□□ 0.05
NCLN-203ENST00000587740 MNS1Q8NEH6 495 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 PEX13Q92968 403 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 SNF8Q96H20 258 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 SERPINB12Q96P63 405 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 TRIM31Q9BZY9 425 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 SIDT1Q9NXL6 827 aaKnown RBP15.36■□□□□ 0.05
NCLN-203ENST00000587740 KLHL3Q9UH77 587 aa15.36■□□□□ 0.05
NCLN-203ENST00000587740 TNRC6AQ8NDV7 1962 aaKnown RBP15.36■□□□□ 0.05
NCLN-203ENST00000587740 SMAPO00193 183 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 CCL22O00626 93 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 POLR1CO15160 346 aaPredicted RBP15.35■□□□□ 0.05
NCLN-203ENST00000587740 RAD51CO43502 376 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 VEGFDO43915 354 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 AVILO75366 819 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 ZNF28P17035 718 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 GNLYP22749 145 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 PSMA3P25788 255 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 PPM1FP49593 454 aaPredicted RBP15.35■□□□□ 0.05
NCLN-203ENST00000587740 MRPS25P82663 173 aaKnown RBP15.35■□□□□ 0.05
NCLN-203ENST00000587740 HHEXQ03014 270 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 NFATC2Q13469 925 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 MAP7Q14244 749 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 MORF4L2Q15014 288 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 LDLRAP1Q5SW96 308 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 ZNF648Q5T619 568 aaPredicted RBP15.35■□□□□ 0.05
NCLN-203ENST00000587740 ARMC3Q5W041 872 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 CASC4Q6P4E1 433 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 ASB18Q6ZVZ8 466 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 SNX20Q7Z614 316 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 GALNT13Q8IUC8 556 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 ULK4Q96C45 1275 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 TTC25Q96NG3 672 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 OR2AG1Q9H205 316 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 RMI1Q9H9A7 625 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 MRM3Q9HC36 420 aaKnown RBP15.35■□□□□ 0.05
NCLN-203ENST00000587740 PRDM8Q9NQV8 689 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 CHRAC1Q9NRG0 131 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 SMOXQ9NWM0 555 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 SYBUQ9NX95 663 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 SAMD15Q9P1V8 674 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 ATXN10Q9UBB4 475 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 TBC1D29Q9UFV1 150 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 ZNHIT2Q9UHR6 403 aa15.35■□□□□ 0.05
NCLN-203ENST00000587740 CRLS1Q9UJA2 301 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms