RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 RAB30Q15771 203 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 AAK1Q2M2I8 961 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 ATP6AP1LQ52LC2 224 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 TMEM31Q5JXX7 168 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 SAMD4BQ5PRF9 694 aaKnown RBP11.06□□□□□ -0.64
LIG3-204ENST00000585740 TCHHL1Q5QJ38 904 aaPredicted RBP11.06□□□□□ -0.64
LIG3-204ENST00000585740 TLDC1Q6P9B6 456 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 PAOXQ6QHF9 649 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 LRRC70Q7Z2Q7 622 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 MILR1Q7Z6M3 343 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 RBM23Q86U06 439 aaKnown RBP11.06□□□□□ -0.64
LIG3-204ENST00000585740 NPAS3Q8IXF0 933 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 DDHD1Q8NEL9 900 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 TMIEQ8NEW7 156 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 HMGCLL1Q8TB92 370 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 METTL6Q8TCB7 284 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 CCDC124Q96CT7 223 aaKnown RBP11.06□□□□□ -0.64
LIG3-204ENST00000585740 HIST1H2AHQ96KK5 128 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 PPP3R2Q96LZ3 170 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 ASB16Q96NS5 453 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 HIST1H2AJQ99878 128 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 H2AFJQ9BTM1 129 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 NTMT1Q9BV86 223 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 APOL5Q9BWW9 433 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 SLC29A3Q9BZD2 475 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 BRINP2Q9C0B6 783 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 NKX2-4Q9H2Z4 354 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 PARVBQ9HBI1 364 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 FBRSL1Q9HCM7 1045 aaKnown RBP11.06□□□□□ -0.64
LIG3-204ENST00000585740 SPAG4Q9NPE6 437 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 TIMM22Q9Y584 194 aa11.06□□□□□ -0.64
LIG3-204ENST00000585740 TCF20Q9UGU0 1960 aaKnown RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 C16orf96A6NNT2 1141 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 HEPACAM2A8MVW5 462 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 FBP2O00757 339 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 OR7A17O14581 309 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 TRIM24O15164 1050 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 TAPBPO15533 448 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 STK16O75716 305 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 BCAS2O75934 225 aaPredicted RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 GUCA1CO95843 209 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 CAPN1P07384 714 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 CTSLP07711 333 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 ELFN1P0C7U0 828 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 EPB42P16452 691 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 ITGB7P26010 798 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 CCR7P32248 378 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 GGT5P36269 586 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 MMP12P39900 470 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 ARL1P40616 181 aaPredicted RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 HSPA7P48741 367 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 RPIAP49247 311 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 CCR3P51677 355 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 THOP1P52888 689 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 AP1S2P56377 157 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 KCNK10P57789 538 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 SEMG2Q02383 582 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 RALGDSQ12967 914 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 TRAF3Q13114 568 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 MYO9BQ13459 2157 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 FLOT2Q14254 428 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 SKIV2LQ15477 1246 aaKnown RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 MAP7D1Q3KQU3 841 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 FNDC3BQ53EP0 1204 aaKnown RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 FAM78AQ5JUQ0 283 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 HENMT1Q5T8I9 393 aaKnown RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 C8orf82Q6P1X6 216 aaPredicted RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 TMC5Q6UXY8 1006 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 UBE2R2Q712K3 238 aaPredicted RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 ZNF765Q7L2R6 523 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 CYP2U1Q7Z449 544 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 HSD11B1LQ7Z5J1 315 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 SPRED2Q7Z698 418 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 TECPR1Q7Z6L1 1165 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 ADGRD2Q7Z7M1 963 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 DHDDSQ86SQ9 333 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 KBTBD6Q86V97 674 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 TMEM126BQ8IUX1 230 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 CPA6Q8N4T0 437 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 CDYL2Q8N8U2 506 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 VN1R2Q8NFZ6 395 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 OR4F6Q8NGB9 312 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 BTN2A2Q8WVV5 523 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 SORCS1Q8WY21 1168 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 RSPRY1Q96DX4 576 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 ASB9Q96DX5 294 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 CCDC97Q96F63 343 aaPredicted RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 NAF1Q96HR8 494 aaKnown RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 PPP1R16AQ96I34 528 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 LRRC3BQ96PB8 259 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 FAM83CQ9BQN1 747 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 SLC12A9Q9BXP2 914 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 SLC32A1Q9H598 525 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 NSUN3Q9H649 340 aaKnown RBP11.05□□□□□ -0.64
LIG3-204ENST00000585740 IPPKQ9H8X2 491 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 SLC28A3Q9HAS3 691 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 HEBP1Q9NRV9 189 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 NMRK1Q9NWW6 199 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 ADA2Q9NZK5 511 aa11.05□□□□□ -0.64
LIG3-204ENST00000585740 C6orf203Q9P0P8 240 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms