RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	ILF2	Q12905	390 aa	Known RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	ZNF177	Q13360	481 aa	Predicted RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	ZRSR2	Q15696	482 aa	Known RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	CHI3L2	Q15782	390 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	TSNAXIP1	Q2TAA8	658 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	C9orf64	Q5T6V5	341 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	TBC1D3G	Q6DHY5	549 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	TBC1D3C	Q6IPX1	549 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	TRMT10B	Q6PF06	316 aa	Known RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	RBM44	Q6ZP01	1051 aa	Known RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	CDHR3	Q6ZTQ4	885 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	CLEC20A	Q6ZU45	233 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	CD163	Q86VB7	1156 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	WDR75	Q8IWA0	830 aa	Known RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	CCDC117	Q8IWD4	279 aa	Predicted RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	TBC1D3	Q8IZP1	549 aa	Predicted RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	SLC22A18AS	Q8N1D0	253 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	SIX6OS1	Q8N1H7	587 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	STK40	Q8N2I9	435 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	ARL14	Q8N4G2	192 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	WDR36	Q8NI36	951 aa	Known RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	CLEC4C	Q8WTT0	213 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	SREK1	Q8WXA9	508 aa	Known RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	JPH3	Q8WXH2	748 aa	Predicted RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	N4BP2L2	Q92802	583 aa	Predicted RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	MIB2	Q96AX9	1013 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	HDAC11	Q96DB2	347 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	MYEOV	Q96EZ4	313 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	MRGPRX3	Q96LB0	322 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	NUDCD1	Q96RS6	583 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	MIPEP	Q99797	713 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	CXorf56	Q9H5V9	222 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	DENND2D	Q9H6A0	471 aa	Predicted RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	SYNDIG1	Q9H7V2	258 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	PCMTD2	Q9NV79	361 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	ARL8B	Q9NVJ2	186 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	DNAJC28	Q9NX36	388 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	FOXJ2	Q9P0K8	574 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	TAGLN3	Q9UI15	199 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	INTS6	Q9UL03	887 aa	Known RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	SCML2	Q9UQR0	700 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	HBS1L	Q9Y450	684 aa	Known RBP	7.33	□□□□□ -1.24
NF1-222	ENST00000582892	L3MBTL1	Q9Y468	752 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	TRPM6	Q9BX84	2022 aa		7.33	□□□□□ -1.24
NF1-222	ENST00000582892	TNRC6A	Q8NDV7	1962 aa	Known RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	CCDC187	A0A096LP49	1063 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	FAM237B	A0A1B0GVD1	139 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892		A8MUI8	341 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	TMEM114	B3SHH9	223 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	MUSK	O15146	869 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	SLC22A2	O15244	555 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	TIMM44	O43615	452 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	KIF1C	O43896	1103 aa	Known RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	DIAPH2	O60879	1101 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	SEMA7A	O75326	666 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	USP1	O94782	785 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	AGFG2	O95081	481 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	SNUPN	O95149	360 aa	Known RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	GSR	P00390	522 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	PROC	P04070	461 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	ALDOA	P04075	364 aa	Known RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	CYBB	P04839	570 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	ACADS	P16219	412 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	ITIH1	P19827	911 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	PRDX6	P30041	224 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	SPR	P35270	261 aa	Predicted RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	UGT1A5	P35504	534 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	ETV5	P41161	510 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	GATA4	P43694	442 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	HARS2	P49590	506 aa	Known RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	CXCR3	P49682	368 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	ARL4D	P49703	201 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	SERPINB8	P50452	374 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	LIMK2	P53671	638 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	MLLT10	P55197	1068 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	POLE2	P56282	527 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	CLDN2	P57739	230 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	DAOA	P59103	153 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	KCNAB2	Q13303	367 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	DEFB133	Q30KQ1	61 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	TRMT5	Q32P41	509 aa	Known RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	HNRNPA1L2	Q32P51	320 aa	Known RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	ACCSL	Q4AC99	568 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	DCAF6	Q58WW2	860 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	TPRG1L	Q5T0D9	272 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	TEDDM1	Q5T9Z0	273 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	C6orf163	Q5TEZ5	329 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	FAXC	Q5TGI0	409 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	KCTD11	Q693B1	232 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	PM20D1	Q6GTS8	502 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	RFWD3	Q6PCD5	774 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	KLHDC10	Q6PID8	442 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	NET1	Q7Z628	596 aa	Predicted RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.32	□□□□□ -1.24
NF1-222	ENST00000582892	C14orf80	Q86SX3	495 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	LINC00523	Q86TU6	105 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	TMEM135	Q86UB9	458 aa		7.32	□□□□□ -1.24
NF1-222	ENST00000582892	FAM131B	Q86XD5	332 aa		7.32	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms