RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 MTHFD1P11586 935 aaKnown RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 ST6GAL1P15907 406 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 CD44P16070 742 aaKnown RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 HLA-DPA1P20036 260 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 MMP13P45452 471 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 DGKQP52824 942 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 YBX1P67809 324 aaKnown RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 CACNG1Q06432 222 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 MYBPHQ13203 477 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 XRCC4Q13426 336 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 ANKRD20A8PQ5CZ79 823 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 PPP1R15BQ5SWA1 713 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 MARC1Q5VT66 337 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 ALS2CLQ60I27 953 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 C11orf96Q7Z7L8 435 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 NOP9Q86U38 636 aaKnown RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 TRAPPC5Q8IUR0 188 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 EID3Q8N140 333 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 WFDC11Q8NEX6 87 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 SUN3Q8TAQ9 357 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 NELFBQ8WX92 580 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 SMARCE1Q969G3 411 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 LYSMD1Q96S90 227 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 ZSCAN5AQ9BUG6 496 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 LIME1Q9H400 295 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 DHX35Q9H5Z1 703 aaKnown RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 MRM3Q9HC36 420 aaKnown RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 SLC24A3Q9HC58 644 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 NPDC1Q9NQX5 325 aaPredicted RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 TXLNGQ9NUQ3 528 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 DHCR7Q9UBM7 475 aaKnown RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 SLC24A2Q9UI40 661 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 AP4E1Q9UPM8 1137 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 CHKBQ9Y259 395 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 MRPS2Q9Y399 296 aaKnown RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 HS3ST3B1Q9Y662 390 aa8.9□□□□□ -0.98
GGA3-212ENST00000582376 CFAP20Q9Y6A4 193 aaKnown RBP8.9□□□□□ -0.98
GGA3-212ENST00000582376 GTPBP10A4D1E9 387 aaKnown RBP8.89□□□□□ -0.99
GGA3-212ENST00000582376 EIF3CLB5ME19 914 aaKnown RBP8.89□□□□□ -0.99
GGA3-212ENST00000582376 E9PLN8 166 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 PROM1O43490 865 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 OR2B3O76000 313 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 USP1O94782 785 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 MLYCDO95822 493 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 MYBL2P10244 700 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 SOX11P35716 441 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 ZNF143P52747 638 aaPredicted RBP8.89□□□□□ -0.99
GGA3-212ENST00000582376 KRT85P78386 507 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 ITKQ08881 620 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 GTF2H3Q13889 308 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 RBBP7Q16576 425 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 KRTCAP3Q53RY4 240 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 PDPK2PQ6A1A2 396 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 ISM2Q6H9L7 571 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 CDHR3Q6ZTQ4 885 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 AMZ2Q86W34 360 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 TAB3Q8N5C8 712 aaPredicted RBP8.89□□□□□ -0.99
GGA3-212ENST00000582376 TRAM1L1Q8N609 369 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 LPCAT1Q8NF37 534 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 SLC30A5Q8TAD4 765 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 CCDC110Q8TBZ0 833 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 AGAP11Q8TF27 550 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 THAP3Q8WTV1 239 aaPredicted RBP8.89□□□□□ -0.99
GGA3-212ENST00000582376 SLC20A1Q8WUM9 679 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 GPR137Q96N19 417 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 EIF3CQ99613 913 aaKnown RBP8.89□□□□□ -0.99
GGA3-212ENST00000582376 VKORC1Q9BQB6 163 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 NUP85Q9BW27 656 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 NAA15Q9BXJ9 866 aaKnown RBP8.89□□□□□ -0.99
GGA3-212ENST00000582376 POLDIP3Q9BY77 421 aaKnown RBP8.89□□□□□ -0.99
GGA3-212ENST00000582376 KIR3DX1Q9H7L2 352 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 NT5MQ9NPB1 228 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 SEPT11Q9NVA2 429 aaKnown RBP8.89□□□□□ -0.99
GGA3-212ENST00000582376 STMN3Q9NZ72 180 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 PTGFRNQ9P2B2 879 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 PPT2Q9UMR5 302 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 CTNND2Q9UQB3 1225 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 AKAP6Q13023 2319 aa8.89□□□□□ -0.99
GGA3-212ENST00000582376 INTS1Q8N201 2190 aaKnown RBP8.88□□□□□ -0.99
GGA3-212ENST00000582376 ANKRD62A6NC57 917 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 SIGLEC16A6NMB1 481 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 ZSCAN9O15535 394 aaPredicted RBP8.88□□□□□ -0.99
GGA3-212ENST00000582376 GADD45BO75293 160 aaPredicted RBP8.88□□□□□ -0.99
GGA3-212ENST00000582376 ZRANB2O95218 330 aaKnown RBP eCLIP8.88□□□□□ -0.99
GGA3-212ENST00000582376 FGFR1OPO95684 399 aaKnown RBP8.88□□□□□ -0.99
GGA3-212ENST00000582376 HPP00738 406 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 F10P00742 488 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 PRLP01236 227 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 CYP1A1P04798 512 aaPredicted RBP8.88□□□□□ -0.99
GGA3-212ENST00000582376 UQCRHP07919 91 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 HOXD4P09016 255 aaPredicted RBP8.88□□□□□ -0.99
GGA3-212ENST00000582376 PYGMP11217 842 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 ABOP16442 354 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 DESP17661 470 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 CA4P22748 312 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 MSX1P28360 303 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 PRDX3P30048 256 aaKnown RBP8.88□□□□□ -0.99
GGA3-212ENST00000582376 GSCP56915 257 aaPredicted RBP8.88□□□□□ -0.99
GGA3-212ENST00000582376 DCDC1P59894 354 aa8.88□□□□□ -0.99
GGA3-212ENST00000582376 RPL26P61254 145 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms