RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PPHLN1Q8NEY8 458 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 SCFD2Q8WU76 684 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 USP6NLQ92738 828 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 SRSF8Q9BRL6 282 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 DENND2DQ9H6A0 471 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 DNAJC18Q9H819 358 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 PELI2Q9HAT8 420 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 INTS10Q9NVR2 710 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 MIOSQ9NXC5 875 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 FBXL17Q9UF56 701 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 CMAHPQ9Y471 501 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 RUSC2Q8N2Y8 1516 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 PI4KAP2A4QPH2 592 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 PGPEP1LA6NFU8 196 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 A6NL46 340 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 GH2P01242 217 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 RB1P06400 928 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 TPOP07202 933 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 ACADMP11310 421 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 TYMPP19971 482 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 PON1P27169 355 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 PSMC4P43686 418 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 THOP1P52888 689 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 KRTAP10-1P60331 282 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 PRKAA1Q13131 559 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 RIGQ13278 110 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 MFAP5Q13361 173 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 CRYMQ14894 314 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 CTU2Q2VPK5 515 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 CCDC30Q5VVM6 783 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 ZNF774Q6NX45 483 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 FAM180BQ6P0A1 224 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 DENND5BQ6ZUT9 1274 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 SH2D5Q6ZV89 423 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 CHST9Q7L1S5 443 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 ERC1Q8IUD2 1116 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 ARID3BQ8IVW6 561 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 SCYL3Q8IZE3 742 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 ZNF843Q8N446 348 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 OR2T12Q8NG77 320 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 ZNRF4Q8WWF5 429 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 HDAC2Q92769 488 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 MOAP1Q96BY2 351 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 MPP4Q96JB8 637 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 C18orf12Q96KH6 178 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 ZNF582Q96NG8 517 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 RHNO1Q9BSD3 238 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 SLA2Q9H6Q3 261 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 ZNF71Q9NQZ8 489 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 SEPT11Q9NVA2 429 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 PNMA2Q9UL42 364 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 LYVE1Q9Y5Y7 322 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 ZHX2Q9Y6X8 837 aa2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-206ENST00000581631 MAGEB17A8MXT2 336 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 RTL8CO15255 209 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 PI15O43692 258 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 GPR137BO60478 399 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 FAM157CP0CG43 387 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 NMBRP28336 390 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 SHC1P29353 583 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 BMXP51813 675 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 DCAF7P61962 342 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 DLG2Q15700 870 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 UGP2Q16851 508 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 FFAR4Q5NUL3 377 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 ALS2CLQ60I27 953 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 KLC3Q6P597 504 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 FASTKD5Q7L8L6 764 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 MAATS1Q7Z4T9 603 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 CDC20BQ86Y33 519 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 LINC00612Q8N6U2 182 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 TBC1D16Q8TBP0 767 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 SLC47A1Q96FL8 570 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 ZNF300Q96RE9 604 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 IWS1Q96ST2 819 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 SIX2Q9NPC8 291 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 EIF2B3Q9NR50 452 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 ECHDC1Q9NTX5 307 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 ATAD3AQ9NVI7 634 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 KLHL8Q9P2G9 620 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 NENFQ9UMX5 172 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 KCNJ14Q9UNX9 436 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 PCDHGA5Q9Y5G8 931 aa2.95□□□□□ -1.94
SMCHD1-206ENST00000581631 STK36Q9NRP7 1315 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 A0A1W2PR77 199 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 OR6C76A6NM76 312 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 NDUFS4O43181 175 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 RSL1D1O76021 490 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 H1F0P07305 194 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 ACP2P11117 423 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 LIFP15018 202 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 TM4SF1P30408 202 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 HADHAP40939 763 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 GARSP41250 739 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 CDH11P55287 796 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 SNRPEP62304 92 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 PPARDQ03181 441 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 GAGE2BQ13066 116 aa2.94□□□□□ -1.94
SMCHD1-206ENST00000581631 PLA2G7Q13093 441 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms