RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 TRABD2AQ86V40 505 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 LCA5Q86VQ0 697 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 ZC3HC1Q86WB0 502 aaKnown RBP15.21■□□□□ 0.03
SS18-216ENST00000580751 SLC35F3Q8IY50 421 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 AVL9Q8NBF6 648 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 KYQ8NBH2 561 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 GPR156Q8NFN8 814 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 MZB1Q8WU39 189 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 CABS1Q96KC9 395 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 WASH6PQ9NQA3 447 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 FBXO6Q9NRD1 293 aaPredicted RBP15.21■□□□□ 0.03
SS18-216ENST00000580751 SIRPGQ9P1W8 387 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 GULP1Q9UBP9 304 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 ACSL5Q9ULC5 683 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 CRYL1Q9Y2S2 319 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 ARHGEF17Q96PE2 2063 aaPredicted RBP15.21■□□□□ 0.03
SS18-216ENST00000580751 KIR2DS5A0A0G2JLQ3 304 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 A0A0G2JNG1 304 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 SMIM23A6NLE4 172 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 KIR2DS3K7RE56 304 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 LIN7AO14910 233 aaPredicted RBP15.2■□□□□ 0.02
SS18-216ENST00000580751 NOBOXO60393 691 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 MT-ND3P03897 115 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 SLC35G4P0C7Q5 338 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 CKMT1AP12532 417 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 CEACAM1P13688 526 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 PKMP14618 531 aaKnown RBP15.2■□□□□ 0.02
SS18-216ENST00000580751 CKMT2P17540 419 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 FMO4P31512 558 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 HALP42357 657 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 NOVA1P51513 510 aaKnown RBP15.2■□□□□ 0.02
SS18-216ENST00000580751 SLC18A1P54219 525 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 MPP1Q00013 466 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 POU4F1Q01851 419 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 PLOD1Q02809 727 aaPredicted RBP15.2■□□□□ 0.02
SS18-216ENST00000580751 RPA4Q13156 261 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 KIR2DS5Q14953 304 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 TMED2Q15363 201 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 TRIP6Q15654 476 aaKnown RBP15.2■□□□□ 0.02
SS18-216ENST00000580751 SYTL3Q4VX76 610 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 C14orf28Q4W4Y0 310 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 CTSL3PQ5NE16 218 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 ABRAXAS1Q6UWZ7 409 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 CFAP206Q8IYR0 622 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 NAGSQ8N159 534 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 ARFGAP2Q8N6H7 521 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 OR6C4Q8NGE1 309 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 ELMO1Q92556 727 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 NAT6Q93015 286 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 ARL8AQ96BM9 186 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 TSPAN17Q96FV3 270 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 VPS39Q96JC1 886 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 BIRC8Q96P09 236 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 GPR22Q99680 433 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 CENPHQ9H3R5 247 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 COG4Q9H9E3 785 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 PRDM8Q9NQV8 689 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 FAM8A1Q9UBU6 413 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 NOVA2Q9UNW9 492 aaKnown RBP15.2■□□□□ 0.02
SS18-216ENST00000580751 PSAT1Q9Y617 370 aa15.2■□□□□ 0.02
SS18-216ENST00000580751 PCNX2A6NKB5 2137 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 KPNA5O15131 536 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 TRIM16O95361 564 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 APOA4P06727 396 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 RPL10P27635 214 aaKnown RBP15.19■□□□□ 0.02
SS18-216ENST00000580751 GABRB3P28472 473 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 SERPINB8P50452 374 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 BIRC2Q13490 618 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 BOP1Q14137 746 aaKnown RBP15.19■□□□□ 0.02
SS18-216ENST00000580751 PUM1Q14671 1186 aaKnown RBP eCLIP15.19■□□□□ 0.02
SS18-216ENST00000580751 SEPT7Q16181 437 aaKnown RBP15.19■□□□□ 0.02
SS18-216ENST00000580751 ZNF658BQ4V348 819 aaPredicted RBP15.19■□□□□ 0.02
SS18-216ENST00000580751 TTMPQ5BVD1 217 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 ZNF789Q5FWF6 425 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 IYDQ6PHW0 289 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 FAM83HQ6ZRV2 1179 aaPredicted RBP15.19■□□□□ 0.02
SS18-216ENST00000580751 C17orf82Q86X59 251 aaPredicted RBP15.19■□□□□ 0.02
SS18-216ENST00000580751 SFRP1Q8N474 314 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 MAPK15Q8TD08 544 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 ASZ1Q8WWH4 475 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 SMC6Q96SB8 1091 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 STN1Q9H668 368 aaKnown RBP15.19■□□□□ 0.02
SS18-216ENST00000580751 POPDC3Q9HBV1 291 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 MKS1Q9NXB0 559 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.19■□□□□ 0.02
SS18-216ENST00000580751 CTNNAL1Q9UBT7 734 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 TBK1Q9UHD2 729 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 PADI4Q9UM07 663 aa15.19■□□□□ 0.02
SS18-216ENST00000580751 LY6G6EA0A0G2JKS1 128 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 HMX2A2RU54 273 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 EME2A4GXA9 379 aaPredicted RBP15.18■□□□□ 0.02
SS18-216ENST00000580751 TRIM49D1C9J1S8 452 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 E5RI56 91 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 NUDT21O43809 227 aaKnown RBP15.18■□□□□ 0.02
SS18-216ENST00000580751 HAUS5O94927 633 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 KCNK5O95279 499 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 EML2O95834 649 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 MPOP05164 745 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 ITGB6P18564 788 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 CHRM3P20309 590 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms