RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CARFQ8N187 725 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 SLC20A1Q8WUM9 679 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 SPATA32Q96LK8 384 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 LYSMD1Q96S90 227 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 LIME1Q9H400 295 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 EPS8L2Q9H6S3 715 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 FANCEQ9HB96 536 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 SLC22A11Q9NSA0 550 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 ABI3Q9P2A4 366 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 MAN1B1Q9UKM7 699 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 TMPRSS11EQ9UL52 423 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 CTNND2Q9UQB3 1225 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 MEMO1Q9Y316 297 aa7.43□□□□□ -1.22
SMARCE1-217ENST00000580654 GTPBP10A4D1E9 387 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 OR6C74A6NCV1 312 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 E7EQ34 232 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 K7ELQ4 463 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 HCRTR1O43613 425 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 MAFKO60675 156 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 SLC25A14O95258 325 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 CTSBP07858 339 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 ESRRAP11474 423 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 BMP2P12643 396 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 ST6GAL1P15907 406 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 CHRNB2P17787 502 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 PREPP48147 710 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 LMAN1P49257 510 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 TNFSF10P50591 281 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 ZNF143P52747 638 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 GSCP56915 257 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 FMO1Q01740 532 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 OGDHQ02218 1023 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 STIM1Q13586 685 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 GALNT3Q14435 633 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 CEBPEQ15744 281 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 INAQ16352 499 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 CAMK4Q16566 473 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 LINC01559Q495D7 138 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 RALGPS1Q5JS13 557 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 RNFT1Q5M7Z0 435 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 ISLR2Q6UXK2 745 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 FAM83HQ6ZRV2 1179 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 RFX8Q6ZV50 586 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 OOSP2Q86WS3 158 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 FMR1NBQ8N0W7 255 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 ZNF511Q8NB15 262 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 GPR26Q8NDV2 337 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 NINJ1Q92982 152 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 SMARCE1Q969G3 411 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 GLYATL1Q969I3 302 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 THOC3Q96J01 351 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 LMF1Q96S06 567 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 PEBP4Q96S96 227 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 KCTD15Q96SI1 283 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 NRTNQ99748 197 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 MESP1Q9BRJ9 268 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 TDRD1Q9BXT4 1180 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 LHPPQ9H008 270 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 ZFAND3Q9H8U3 227 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 SYTL2Q9HCH5 934 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 PLA2G3Q9NZ20 509 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 NOCTQ9UK39 431 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 PSMD13Q9UNM6 376 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 AP4E1Q9UPM8 1137 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 CHKBQ9Y259 395 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 ZNF835Q9Y2P0 537 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 FHOD1Q9Y613 1164 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 HS3ST3B1Q9Y662 390 aa7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 CFAP20Q9Y6A4 193 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-217ENST00000580654 C1orf232A0A0U1RR37 186 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 SIGLEC16A6NMB1 481 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 VEGFDO43915 354 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 HBQ1P09105 142 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 UNGP13051 313 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 PVRP15151 417 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 POLR2CP19387 275 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 ITGAXP20702 1163 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 CDH3P22223 829 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 MMP11P24347 488 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 HALP42357 657 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 MMP13P45452 471 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 RPL7AP62424 266 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 PMP22Q01453 160 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 DPYSQ14117 519 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 ZNF569Q5MCW4 686 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 ALS2CLQ60I27 953 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 RHBDD2Q6NTF9 364 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 KIRREL2Q6UWL6 708 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 Q6ZPB1 254 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 CDHR3Q6ZTQ4 885 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 CYP4V2Q6ZWL3 525 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 TMEM200AQ86VY9 491 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 NDUFAF2Q8N183 169 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 PSMF1Q92530 271 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 INSM2Q96T92 566 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 PCDHB18PQ96TA0 734 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 C17orf62Q9BQA9 187 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 SELENOOQ9BVL4 669 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 NUP85Q9BW27 656 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 SPATA16Q9BXB7 569 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms