RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 OR1L3Q8NH93 324 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PPP4R1Q8TF05 950 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 INPP5DQ92835 1189 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 C12orf66Q96MD2 445 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 INSM2Q96T92 566 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 WDR77Q9BQA1 342 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SLC25A51Q9H1U9 297 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ATP13A2Q9NQ11 1180 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GPN3Q9UHW5 284 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 OSGIN2Q9Y236 505 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 AP1M2Q9Y6Q5 423 aa11.86□□□□□ -0.51
CDK5RAP3-216ENST00000579853 DOCK10Q96BY6 2186 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MGAT4DA6NG13 374 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PRSS44E7EML9 344 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LDB2O43679 373 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZG16O60844 167 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LCA5LO95447 670 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SLC35G4P0C7Q5 338 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 POLR2CP19387 275 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TSFMP43897 325 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TNNT3P45378 269 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ARCN1P48444 511 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GBE1Q04446 702 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZBTB17Q13105 803 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KRT33BQ14525 404 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PPP2R5EQ16537 467 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CYP2A13Q16696 494 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZNF789Q5FWF6 425 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 FCRL6Q6DN72 434 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 APTXQ7Z2E3 356 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GDF7Q7Z4P5 450 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 RASGEF1AQ8N9B8 481 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 FAR1Q8WVX9 515 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 N4BP2L2Q92802 583 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 FAF2Q96CS3 445 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 IL26Q9NPH9 171 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 P4HTMQ9NXG6 502 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 HACD3Q9P035 362 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 COPG2Q9UBF2 871 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 NTNG1Q9Y2I2 539 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PTRH2Q9Y3E5 179 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 KLF2Q9Y5W3 355 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CFAP20Q9Y6A4 193 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CCDC88CQ9P219 2028 aa11.85□□□□□ -0.51
CDK5RAP3-216ENST00000579853 A0A1W2PQJ5 194 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GSAPA4D1B5 854 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 OR2AG2A6NM03 316 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZNF749O43361 778 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 STSP08842 583 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PRDX3P30048 256 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CA5AP35218 305 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PTGER4P35408 488 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SPAM1P38567 509 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CTSCP53634 463 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 DCDP81605 110 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SLC10A2Q12908 348 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 AIMP2Q13155 320 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ART3Q13508 389 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PDK1Q15118 436 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PCSK7Q16549 785 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 IRAK1BP1Q5VVH5 260 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MLIPQ5VWP3 458 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZNF385CQ66K41 422 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 B3GNTL1Q67FW5 361 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SPOCD1Q6ZMY3 1216 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 FAM83HQ6ZRV2 1179 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ACVR1CQ8NER5 493 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 OR4E2Q8NGC2 313 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 OR2Y1Q8NGV0 311 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 OR2L2Q8NH16 312 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PROKR1Q8TCW9 393 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LCN9Q8WX39 176 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TADA1Q96BN2 335 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PTERQ96BW5 349 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CCM2Q9BSQ5 444 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 AP1M1Q9BXS5 423 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 WWP1Q9H0M0 922 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SRMSQ9H3Y6 488 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 BPIFA1Q9NP55 256 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ANO10Q9NW15 660 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 NDOR1Q9UHB4 597 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LCMT1Q9UIC8 334 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 NOVA2Q9UNW9 492 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 BZW2Q9Y6E2 419 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PCM1Q15154 2024 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ABCA2Q9BZC7 2435 aa11.84□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GLYATL1P3A0A0U1RQE8 302 aa11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 AGPSO00116 658 aa11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 AURKAO14965 403 aa11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 MSH3P20585 1137 aa11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 HNRNPH3P31942 346 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 AP1B1Q10567 949 aa11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 FNBP1LQ5T0N5 605 aa11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 GPRC6AQ5T6X5 926 aa11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 RHBDD2Q6NTF9 364 aa11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 FBXO38Q6PIJ6 1188 aa11.83□□□□□ -0.52
CDK5RAP3-216ENST00000579853 PQLC3Q8N755 202 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms