RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ASZ1Q8WWH4 475 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 CPT1BQ92523 772 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 ELMO2Q96JJ3 720 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 LINC00615Q96LM1 132 aaPredicted RBP6.4□□□□□ -1.38
TRAF4-213ENST00000578917 C9orf72Q96LT7 481 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 RUNDC3BQ96NL0 473 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 CTRCQ99895 268 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 KIFC1Q9BW19 673 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 DDX47Q9H0S4 455 aaKnown RBP6.4□□□□□ -1.38
TRAF4-213ENST00000578917 MVB12BQ9H7P6 319 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 COG4Q9H9E3 785 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 ASCL3Q9NQ33 180 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 PPANQ9NQ55 473 aaKnown RBP6.4□□□□□ -1.38
TRAF4-213ENST00000578917 OCIAD1Q9NX40 245 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 RNF14Q9UBS8 474 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 ASF1AQ9Y294 204 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 PCDHGA7Q9Y5G6 932 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.4□□□□□ -1.38
TRAF4-213ENST00000578917 RPS6KL1Q9Y6S9 549 aa6.4□□□□□ -1.38
TRAF4-213ENST00000578917 CFAP47Q6ZTR5 3102 aa6.4□□□□□ -1.39
TRAF4-213ENST00000578917 IGSF10Q6WRI0 2623 aa6.4□□□□□ -1.39
TRAF4-213ENST00000578917 FAM208BQ5VWN6 2430 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ANKRD36A6QL64 1941 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PRR19A6NJB7 356 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CDRT15L2A8MXV6 281 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 E5RI56 91 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 STMND1H3BQB6 276 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 KPNA5O15131 536 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 TOX3O15405 576 aaPredicted RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 SGTAO43765 313 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 KIF1CO43896 1103 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 RPN2P04844 631 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 MLNP12872 115 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 POLR2CP19387 275 aaPredicted RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CDH3P22223 829 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PDHA2P29803 388 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 FMO4P31512 558 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 FOXN2P32314 431 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ETV5P41161 510 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CAPZBP47756 277 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 LEPRP48357 1165 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ARCN1P48444 511 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ATP1A2P50993 1020 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 GFERP55789 205 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 TMPRSS3P57727 454 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 MC2RQ01718 297 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 TLE3Q04726 772 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ACVR1Q04771 509 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 KCNJ11Q14654 390 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ANKRD20A4Q4UJ75 823 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 DNAJC21Q5F1R6 531 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 MANEAQ5SRI9 462 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 TMTC4Q5T4D3 741 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 RNF187Q5TA31 235 aaPredicted RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ARHGAP40Q5TG30 622 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ANKRD22Q5VYY1 191 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CAPRIN2Q6IMN6 1127 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 DUS1LQ6P1R4 473 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CYB5D1Q6P9G0 228 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CEACAM20Q6UY09 585 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PACS1Q6VY07 963 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 SYDE1Q6ZW31 735 aaPredicted RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 MICALCLQ6ZW33 695 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ZNF534Q76KX8 674 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 OTOAQ7RTW8 1153 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ARHGAP22Q7Z5H3 698 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CLEC14AQ86T13 490 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PDZD3Q86UT5 571 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CAND1Q86VP6 1230 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 AMIGO1Q86WK6 493 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 LRRC6Q86X45 466 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 RASGRP3Q8IV61 690 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PDIK1LQ8N165 341 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 MPP5Q8N3R9 675 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 IL22RA1Q8N6P7 574 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 SIDT2Q8NBJ9 832 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 MCUQ8NE86 351 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ACVR1CQ8NER5 493 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 GPR150Q8NGU9 434 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 RSC1A1Q92681 617 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 N4BP2L2Q92802 583 aaPredicted RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 STAMBPL1Q96FJ0 436 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 SGSM3Q96HU1 749 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 RMDN2Q96LZ7 410 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 FOPNLQ96NB1 174 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 FCRL3Q96P31 734 aaPredicted RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 TEFMQ96QE5 360 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PANX3Q96QZ0 392 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 OR6C1Q96RD1 312 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CCNL2Q96S94 520 aaPredicted RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 TCF12Q99081 682 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 KRT12Q99456 494 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 ZPBPQ9BS86 351 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 HGH1Q9BTY7 390 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 TRIM31Q9BZY9 425 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CCDC68Q9H2F9 335 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 TRIT1Q9H3H1 467 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 XKR8Q9H6D3 395 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms