RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 POU2F1P14859 743 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 NOS3P29474 1203 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 LGALS3BPQ08380 585 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 DPY19L2P1Q6NXN4 242 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 OR4A15Q8NGL6 344 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ATL1Q8WXF7 558 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 SNX27Q96L92 541 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 MEAF6Q9HAF1 191 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ITM2CQ9NQX7 267 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 LRP6O75581 1613 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 GRID2O43424 1007 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ERN1O75460 977 aaKnown RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 IGSF6O95976 241 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 CHRNA1P02708 482 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ATP5C1P36542 298 aaKnown RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 PBX3P40426 434 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 INCA1Q0VD86 236 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 GRM2Q14416 872 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 SMU1Q2TAY7 513 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 FAM171A1Q5VUB5 890 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 CRYBG2Q8N1P7 616 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 MINDY1Q8N5J2 469 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ASCC1Q8N9N2 400 aaKnown RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 SIDT2Q8NBJ9 832 aaKnown RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 PCED1BQ96HM7 432 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 TCF25Q9BQ70 676 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 NPLQ9BXD5 320 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 SEZ6LQ9BYH1 1024 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 RNF6Q9Y252 685 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 PCP4L1A6NKN8 68 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC30A4O14863 429 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 KERAO60938 352 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 CPNE3O75131 537 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 XYLBO75191 536 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 ECI2O75521 394 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 RPL9P32969 192 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 RPL3P39023 403 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 RORCP51449 518 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 CD83Q01151 205 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 FOXB2Q5VYV0 432 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 DEF8Q6ZN54 512 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 DNAJB8Q8NHS0 232 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 GTPBP3Q969Y2 492 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 HMCESQ96FZ2 354 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 PRSS51A0A1B0GVH4 220 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 MYBPHLA2RUH7 354 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 KRBA1A5PL33 1030 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 SCAMP3O14828 347 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 SMIM10L2AP0DMW4 78 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 SMIM10L2BP0DMW5 78 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 IFI30P13284 250 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 DARSP14868 501 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 AKR1D1P51857 326 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 PARP15Q460N3 678 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 RAB6CQ53S08 254 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 LAPTM4BQ86VI4 370 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 IFNLR1Q8IU57 520 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 TFAP2CQ92754 450 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 LPPQ93052 612 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 RAB6CQ9H0N0 254 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 GOLGA4Q13439 2230 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 SETD1AO15047 1707 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 C9IYK1 514 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 BRCC3P46736 316 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 YBEYP58557 167 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 FBXO43Q4G163 708 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 NOMO2Q5JPE7 1267 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 TRMT11Q7Z4G4 463 aaKnown RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 PEX5LQ8IYB4 626 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 IZUMO1Q8IYV9 350 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 KRT78Q8N1N4 520 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZNF614Q8N883 585 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 KDM1BQ8NB78 822 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 C9orf43Q8TAL5 461 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 PHOX2BQ99453 314 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 MINDY3Q9H8M7 445 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 CCDC177Q9NQR7 707 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 ARMC1Q9NVT9 282 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 CLCA2Q9UQC9 943 aa12.92□□□□□ -0.34
PCDHGB3-201ENST00000576222 A0A1W2PQH9 124 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 TCAF2A6NFQ2 919 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 OXSR1O95747 527 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 NPPAP01160 153 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 RFX3P48380 749 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 WNT7BP56706 349 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 GALNT2Q10471 571 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 IGFN1Q86VF2 1251 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 C2CD4AQ8NCU7 369 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 PSMG2Q969U7 264 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 BTN2A3PQ96KV6 586 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 PCDHB3Q9Y5E6 796 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 HEMK1Q9Y5R4 338 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 MAGEB17A8MXT2 336 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 NDUFB5O43674 189 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 CREG1O75629 220 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 CHRM5P08912 532 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 GSTT2P0CG29 244 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms