RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	CCM2	Q9BSQ5	444 aa		13.82	□□□□□ -0.2
EDC4-210	ENST00000575507	TUBB2B	Q9BVA1	445 aa		13.82	□□□□□ -0.2
EDC4-210	ENST00000575507	SLC12A9	Q9BXP2	914 aa		13.82	□□□□□ -0.2
EDC4-210	ENST00000575507	KIR3DX1	Q9H7L2	352 aa		13.82	□□□□□ -0.2
EDC4-210	ENST00000575507	COG4	Q9H9E3	785 aa		13.82	□□□□□ -0.2
EDC4-210	ENST00000575507	SMARCAL1	Q9NZC9	954 aa		13.82	□□□□□ -0.2
EDC4-210	ENST00000575507	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.82	□□□□□ -0.2
EDC4-210	ENST00000575507	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.82	□□□□□ -0.2
EDC4-210	ENST00000575507	OR6C74	A6NCV1	312 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	PGRMC1	O00264	195 aa	Known RBP	13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	STK17B	O94768	372 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	TIAF1	O95411	115 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	DLGAP3	O95886	979 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	GOT2	P00505	430 aa	Known RBP	13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	APRT	P07741	180 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	RALB	P11234	206 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	FOLR1	P15328	257 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	NELFE	P18615	380 aa	Known RBP	13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	ADRA1D	P25100	572 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	PREP	P48147	710 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	SKIDA1	Q1XH10	827 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	TAF1B	Q53T94	588 aa	Predicted RBP	13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	CEACAM20	Q6UY09	585 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	PPP1R21	Q6ZMI0	780 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	OR4E2	Q8NGC2	313 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	HEXDC	Q8WVB3	486 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	EXTL1	Q92935	676 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	WBP1	Q96G27	269 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	ZDHHC12	Q96GR4	267 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	SLC41A2	Q96JW4	573 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	TEFM	Q96QE5	360 aa	Known RBP	13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	RANBP9	Q96S59	729 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	CHRAC1	Q9NRG0	131 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	HRASLS2	Q9NWW9	162 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	PAK5	Q9P286	719 aa		13.81	□□□□□ -0.2
EDC4-210	ENST00000575507	TCRBV7S3A2	A0A539	114 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	HEATR9	A2RTY3	570 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	KLHL33	A6NCF5	533 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	OR5K3	A6NET4	321 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	CFAP99	D6REC4	459 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507		E7EVH7	732 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	SLC35G4	P0C7Q5	338 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	TPBGL	P0DKB5	382 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	F8A1	P23610	371 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	LMAN1	P49257	510 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	KPNA2	P52292	529 aa	Known RBP	13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	CRADD	P78560	199 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	BRD3	Q15059	726 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	PLCL1	Q15111	1095 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	TTC27	Q6P3X3	843 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	LDB1	Q86U70	411 aa	Predicted RBP	13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	IL22RA1	Q8N6P7	574 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	CCDC89	Q8N998	374 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	ZFPM2	Q8WW38	1151 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	ZNF592	Q92610	1267 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	MS4A14	Q96JA4	679 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	FERD3L	Q96RJ6	166 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	HOMER3	Q9NSC5	361 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	IL17B	Q9UHF5	180 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	RIMKLB	Q9ULI2	386 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	MGA	Q8IWI9	3026 aa		13.8	□□□□□ -0.2
EDC4-210	ENST00000575507	SDK2	Q58EX2	2172 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	EIF4E1B	A6NMX2	242 aa	Known RBP	13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	BTN3A3	O00478	584 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	ZNF185	O15231	689 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	FGF5	P12034	268 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	POLR2C	P19387	275 aa	Predicted RBP	13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	NSG1	P42857	185 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	PAFAH1B1	P43034	410 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	ATP1A2	P50993	1020 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	SESN2	P58004	480 aa	Predicted RBP	13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	TRIP13	Q15645	432 aa	Predicted RBP	13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	TBR1	Q16650	682 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	CREG2	Q8IUH2	290 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	NLGN4X	Q8N0W4	816 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	ZPBP	Q9BS86	351 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	TCAF1	Q9Y4C2	921 aa		13.79	□□□□□ -0.2
EDC4-210	ENST00000575507	GOLGA6L10	A0A0M3HER8	536 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	SLC5A10	A0PJK1	596 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	IQCF5	A8MTL0	148 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	NKX2-8	O15522	239 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	SPAG6	O75602	509 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	URI1	O94763	535 aa	Predicted RBP	13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	AP2A2	O94973	939 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	EBLN1	P0CF75	366 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	MAP4	P27816	1152 aa	Known RBP	13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	ACADL	P28330	430 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	NMBR	P28336	390 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	TERF1	P54274	439 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	BASP1	P80723	227 aa	Known RBP	13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	PRKG2	Q13237	762 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	ITIH4	Q14624	930 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	IL11RA	Q14626	422 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	PCID2	Q5JVF3	399 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	PACS1	Q6VY07	963 aa		13.78	□□□□□ -0.2
EDC4-210	ENST00000575507	ACVR1C	Q8NER5	493 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms