RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	TMCO1	Q9UM00	188 aa		11.66	□□□□□ -0.54
PRPF8-212	ENST00000575116	PRKAB1	Q9Y478	270 aa		11.66	□□□□□ -0.54
PRPF8-212	ENST00000575116	ABCA7	Q8IZY2	2146 aa		11.66	□□□□□ -0.54
PRPF8-212	ENST00000575116	BTN3A1	O00481	513 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	BIRC5	O15392	142 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	KERA	O60938	352 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	TOP3B	O95985	862 aa	Known RBP	11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	CSF2	P04141	144 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	ENO2	P09104	434 aa	Predicted RBP	11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	TPBGL	P0DKB5	382 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	ACP5	P13686	325 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	CPA3	P15088	417 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	TAC1	P20366	129 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	GLRB	P48167	497 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	CSNK1E	P49674	416 aa	Known RBP	11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	SIM2	Q14190	667 aa	Predicted RBP	11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	NFE2L1	Q14494	772 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	PLA2G4E	Q3MJ16	856 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	TUBB8	Q3ZCM7	444 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	CDKL4	Q5MAI5	379 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	XKR5	Q6UX68	686 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	RD3	Q7Z3Z2	195 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	SPATS2	Q86XZ4	545 aa	Known RBP	11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	HID1	Q8IV36	788 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	RASGRP3	Q8IV61	690 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	VRK3	Q8IV63	474 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	PHACTR4	Q8IZ21	702 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	ANKRD42	Q8N9B4	389 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	ARMC2	Q8NEN0	867 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	CEP76	Q8TAP6	659 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	MDM1	Q8TC05	714 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	PTER	Q96BW5	349 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	CCDC126	Q96EE4	140 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	PDXP	Q96GD0	296 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	LOXL4	Q96JB6	756 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	ATOH8	Q96SQ7	321 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	SLC12A9	Q9BXP2	914 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	ALG9	Q9H6U8	611 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	TM7SF3	Q9NS93	570 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	PCOLCE2	Q9UKZ9	415 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	RNF112	Q9ULX5	631 aa		11.65	□□□□□ -0.54
PRPF8-212	ENST00000575116	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.65	□□□□□ -0.55
PRPF8-212	ENST00000575116	LRP4	O75096	1905 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116		G3V2L1	256 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	CDC7	O00311	574 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	IFRD1	O00458	451 aa	Predicted RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	PSIP1	O75475	530 aa	Known RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	SBK3	P0C264	359 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	CTSE	P14091	401 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	NME1	P15531	152 aa	Known RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	CYP2A7	P20853	494 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	ACADL	P28330	430 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	PDHA2	P29803	388 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	PREP	P48147	710 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	KCNC1	P48547	511 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	ATP1A2	P50993	1020 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	PRKAA2	P54646	552 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	WDR4	P57081	412 aa	Known RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	CDKL1	Q00532	357 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	IL9R	Q01113	521 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	CTBS	Q01459	385 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	ILF3	Q12906	894 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	TSN	Q15631	228 aa	Known RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	DUOXA1	Q1HG43	343 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	ZC3H14	Q6PJT7	736 aa	Known RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	ABRAXAS1	Q6UWZ7	409 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	UNC5D	Q6UXZ4	953 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	ZYG11A	Q6WRX3	759 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	PDZD3	Q86UT5	571 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	GPSM1	Q86YR5	675 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	SLC22A9	Q8IVM8	553 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	CCDC63	Q8NA47	563 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	MAGEC3	Q8TD91	643 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	MCOLN3	Q8TDD5	553 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	SKA2	Q8WVK7	121 aa	Predicted RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	SREK1	Q8WXA9	508 aa	Known RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	GSDMC	Q9BYG8	508 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	TRIM54	Q9BYV2	358 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	TMEM168	Q9H0V1	697 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	C12orf65	Q9H3J6	166 aa	Known RBP	11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	PARVB	Q9HBI1	364 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	COPG2	Q9UBF2	871 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	XPR1	Q9UBH6	696 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	FAM8A1	Q9UBU6	413 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	DNAJC16	Q9Y2G8	782 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	OARD1	Q9Y530	152 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	BDP1	A6H8Y1	2624 aa		11.64	□□□□□ -0.55
PRPF8-212	ENST00000575116	NPEPPSL1	A6NEC2	478 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	KLK8	O60259	260 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	DFNA5	O60443	496 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	SMIM24	O75264	130 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	CAT	P04040	527 aa	Known RBP	11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	RPN2	P04844	631 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms