RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 RSL1D1O76021 490 aaKnown RBP23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 MYOGP15173 224 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 FPGSQ05932 587 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 ZXDCQ2QGD7 858 aaPredicted RBP23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 PDCD4Q53EL6 469 aaKnown RBP23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 ARSIQ5FYB1 569 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 PRSS36Q5K4E3 855 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 ZNF648Q5T619 568 aaPredicted RBP23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 FRS2Q8WU20 508 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 TMEM74Q96NL1 305 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 INTS7Q9NVH2 962 aaKnown RBP23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 CTSLP07711 333 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 DDX6P26196 483 aaKnown RBP eCLIP23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 CRY1Q16526 586 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 AP5B1Q2VPB7 878 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 SGO1Q5FBB7 561 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 TCEAL5Q5H9L2 206 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 IFNEQ86WN2 208 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 PCDHGB4Q9UN71 923 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 USP22Q9UPT9 525 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 CCL27Q9Y4X3 112 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 PCDHGB5Q9Y5G0 923 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 PCDHA9Q9Y5H5 950 aa23.21■■□□□ 1.31
NPLOC4-217ENST00000574897 REV3LO60673 3130 aa23.2■■□□□ 1.31
NPLOC4-217ENST00000574897 TCF20Q9UGU0 1960 aaKnown RBP23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 IGLV3-16A0A075B6K0 115 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 POLR2EP19388 210 aaKnown RBP23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 PTPN5P54829 565 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 HMGCS1Q01581 520 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 PPIGQ13427 754 aaKnown RBP eCLIP23.2■■□□□ 1.36e-7■■□□□ 12.1
NPLOC4-217ENST00000574897 BOP1Q14137 746 aaKnown RBP23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 TLR1Q15399 786 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 TTLL9Q3SXZ7 439 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 SULT1C3Q6IMI6 304 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 SLC2A7Q6PXP3 512 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 Q6ZVL8 140 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 AMIGO2Q86SJ2 522 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 KIAA2013Q8IYS2 634 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 SKA2Q8WVK7 121 aaPredicted RBP23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 CANT1Q8WVQ1 401 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 TMEM125Q96AQ2 219 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 GID8Q9NWU2 228 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 KLQ9UEF7 1012 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 LZTS1Q9Y250 596 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 LRRK1Q38SD2 2015 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 LOC730098B7Z3J9 87 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 AKT1P31749 480 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 RECQLP46063 649 aaPredicted RBP23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 MRPL19P49406 292 aaKnown RBP23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 SPPL2CQ8IUH8 684 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 BEND7Q8N7W2 519 aaPredicted RBP23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 VCXQ9H320 206 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 FAM8A1Q9UBU6 413 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 CNOT6Q9ULM6 557 aaKnown RBP23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 PDE10AQ9Y233 779 aa23.2■■□□□ 1.3
NPLOC4-217ENST00000574897 CXorf51AA0A1B0GTR3 108 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 K7EPI3 171 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 EEDO75530 441 aaKnown RBP23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 MESP2Q0VG99 397 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 RNF220Q5VTB9 566 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 HMBOX1Q6NT76 420 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 RBM23Q86U06 439 aaKnown RBP23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 PFDN4Q9NQP4 134 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 HEBP1Q9NRV9 189 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 SUN2Q9UH99 717 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 ZNHIT2Q9UHR6 403 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 SNX13Q9Y5W8 968 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 LINC01553A4QN01 128 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 TIPRLO75663 272 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 AOAHP28039 575 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 ETV3P41162 512 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 RPIAP49247 311 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 DGKQP52824 942 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 RPL38P63173 70 aaKnown RBP23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 CDKL1Q00532 357 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 PLIN5Q00G26 463 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 GRIK2Q13002 908 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 CYP20A1Q6UW02 462 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 ADCY4Q8NFM4 1077 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 ITFG1Q8TB96 612 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 MTFMTQ96DP5 389 aaKnown RBP23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 HEPHQ9BQS7 1158 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 PIF1Q9H611 641 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 PCDH12Q9NPG4 1184 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 ARL15Q9NXU5 204 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 ZIM2Q9NZV7 527 aa23.19■■□□□ 1.3
NPLOC4-217ENST00000574897 WASH3PC4AMC7 463 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 EPORP19235 508 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 MTX3Q5HYI7 312 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 COQ5Q5HYK3 327 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 PRMT9Q6P2P2 845 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 C12orf40Q86WS4 652 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 ZFAND4Q86XD8 727 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 OR2T34Q8NGX1 318 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 OR2T3Q8NH03 318 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 BTBD9Q96Q07 612 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 CCT7Q99832 543 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 FAM234BA2RU67 622 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 OR56A5P0C7T3 313 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 MTHFD1P11586 935 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms