RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 KCNK6Q9Y257 313 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 KMT2EQ8IZD2 1858 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 ATXN2Q99700 1313 aaKnown RBP23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 TARM1B6A8C7 271 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 G3V2L1 256 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 SP9P0CG40 484 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 ZNF542PQ5EBM4 170 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 LYSMD4Q5XG99 296 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 SLC22A15Q8IZD6 547 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 RNF112Q9ULX5 631 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 H3BM21 787 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 CPA3P15088 417 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 KCNA4P22459 653 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 EIF2B5Q13144 721 aaKnown RBP23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 PCLAFQ15004 111 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 PLK5Q496M5 336 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 IQCHQ86VS3 1027 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 ATOH8Q96SQ7 321 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 OSGEPL1Q9H4B0 414 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 ZSCAN32Q9NX65 697 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 COPG2Q9UBF2 871 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 ST14Q9Y5Y6 855 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 LRP4O75096 1905 aa23.54■■□□□ 1.36
ATPAF1-213ENST00000574428 RASGRP1O95267 797 aa23.53■■□□□ 1.36
ATPAF1-213ENST00000574428 MPC1LP0DKB6 136 aa23.53■■□□□ 1.36
ATPAF1-213ENST00000574428 ABRQ12979 859 aa23.53■■□□□ 1.36
ATPAF1-213ENST00000574428 ZNF528Q3MIS6 628 aa23.53■■□□□ 1.36
ATPAF1-213ENST00000574428 SBSNQ6UWP8 590 aa23.53■■□□□ 1.36
ATPAF1-213ENST00000574428 RHEBL1Q8TAI7 183 aa23.53■■□□□ 1.36
ATPAF1-213ENST00000574428 STAG3L4Q8TBR4 150 aa23.53■■□□□ 1.36
ATPAF1-213ENST00000574428 TLR4O00206 839 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 BCAT2O15382 392 aaPredicted RBP23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 KERAO60938 352 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 BPGMP07738 259 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 MYL2P10916 166 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 VCLP18206 1134 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 CSNK1EP49674 416 aaKnown RBP23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 IL9RQ01113 521 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 DMPKQ09013 629 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 METRNLQ641Q3 311 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 ZYG11AQ6WRX3 759 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 NEK10Q6ZWH5 1172 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 CEP68Q76N32 757 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 DCP2Q8IU60 420 aaKnown RBP23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 CFAP61Q8NHU2 1237 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 RDH11Q8TC12 318 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 TMEM168Q9H0V1 697 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 TCEAL2Q9H3H9 227 aaPredicted RBP23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 UTP6Q9NYH9 597 aaKnown RBP23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 KLF15Q9UIH9 416 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 PSMD13Q9UNM6 376 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 GON4LQ3T8J9 2241 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 KLHL33A6NCF5 533 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 NEMP2A6NFY4 417 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 UBXN8O00124 270 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 ALDH3A1P30838 453 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 OVGP1Q12889 678 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 GLIPR1L2Q4G1C9 344 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 ADAMTSL2Q86TH1 951 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 PARGQ86W56 976 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 SPATS2Q86XZ4 545 aaKnown RBP23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 C10orf107Q8IVU9 208 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 SPDYE1Q8NFV5 336 aaPredicted RBP23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 DLG3Q92796 817 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 OR52A5Q9H2C5 316 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 DGKBQ9Y6T7 804 aa23.52■■□□□ 1.36
ATPAF1-213ENST00000574428 SUPT3HB4E1H0 165 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 DLX3O60479 287 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 SUPT3HO75486 399 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 RPL10P27635 214 aaKnown RBP23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 AFF3P51826 1226 aaKnown RBP23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 HK3P52790 923 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 PLOD1Q02809 727 aaPredicted RBP23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 RPA4Q13156 261 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 PHKG1Q16816 387 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 PPP1R3AQ16821 1122 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 FRA10AC1Q70Z53 315 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 GPSM1Q86YR5 675 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 CCL4L1Q8NHW4 92 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 ASB11Q8WXH4 323 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 COL25A1Q9BXS0 654 aaPredicted RBP23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 DPEP2Q9H4A9 486 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 RABEP2Q9H5N1 569 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 MID2Q9UJV3 735 aa23.51■■□□□ 1.35
ATPAF1-213ENST00000574428 PRR19A6NJB7 356 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 MATN4O95460 622 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 TNFP01375 233 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 AK4P27144 223 aaPredicted RBP23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 CTBSQ01459 385 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 UBE2R2Q712K3 238 aaPredicted RBP23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 NUDCD3Q8IVD9 361 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 ZBTB44Q8NCP5 570 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 EPN3Q9H201 632 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 DNAJC28Q9NX36 388 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 NCF1BA6NI72 391 aaPredicted RBP23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 NCF1CA8MVU1 366 aaPredicted RBP23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 BIRC5O15392 142 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 MTHFD2P13995 350 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 NCF1P14598 390 aaPredicted RBP23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 CNR2P34972 360 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms