RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ITGA3P26006 1051 aa4.33□□□□□ -1.72
CDC27-216ENST00000574304 NAP1L1P55209 391 aaKnown RBP4.33□□□□□ -1.72
CDC27-216ENST00000574304 CDH11P55287 796 aa4.33□□□□□ -1.72
CDC27-216ENST00000574304 CXCL9Q07325 125 aa4.33□□□□□ -1.72
CDC27-216ENST00000574304 TMEM143Q96AN5 459 aa4.33□□□□□ -1.72
CDC27-216ENST00000574304 KCNK15Q9H427 330 aa4.33□□□□□ -1.72
CDC27-216ENST00000574304 HAUS2Q9NVX0 235 aa4.33□□□□□ -1.72
CDC27-216ENST00000574304 ARHGEF38Q9NXL2 777 aa4.33□□□□□ -1.72
CDC27-216ENST00000574304 LARSQ9P2J5 1176 aaKnown RBP4.33□□□□□ -1.72
CDC27-216ENST00000574304 RABGAP1Q9Y3P9 1069 aa4.33□□□□□ -1.72
CDC27-216ENST00000574304 STK36Q9NRP7 1315 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 A0A1W2PQ09 198 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 NR5A2O00482 541 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 PSMD14O00487 310 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 CTDSP2O14595 271 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 SSX4O60224 188 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 CLPTM1O96005 669 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 IGLV1-44P01699 117 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 VPREB1P12018 145 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 HOXD13P35453 343 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 ARSEP51690 589 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 PNLIPRP2P54317 469 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 PNRC1Q12796 327 aaPredicted RBP4.32□□□□□ -1.72
CDC27-216ENST00000574304 SIM2Q14190 667 aaPredicted RBP4.32□□□□□ -1.72
CDC27-216ENST00000574304 FCN2Q15485 313 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 FAM205BPQ63HN1 556 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 ZNF790Q6PG37 636 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 CORO6Q6QEF8 472 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 HAUS6Q7Z4H7 955 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 RPAP2Q8IXW5 612 aaPredicted RBP4.32□□□□□ -1.72
CDC27-216ENST00000574304 DNAJC22Q8N4W6 341 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 CPSF7Q8N684 471 aaKnown RBP4.32□□□□□ -1.72
CDC27-216ENST00000574304 HCAR2Q8TDS4 363 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 SGK494Q96LW2 274 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 OR6C1Q96RD1 312 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 MYADMQ96S97 322 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 ASCL2Q99929 193 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 RTP3Q9BQQ7 232 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 SDF4Q9BRK5 362 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 C16orf70Q9BSU1 422 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 GFRA4Q9GZZ7 299 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 GHITMQ9H3K2 345 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 TBC1D22BQ9NU19 505 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 RHCGQ9UBD6 479 aa4.32□□□□□ -1.72
CDC27-216ENST00000574304 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.32□□□□□ -1.728e-7■□□□□ 9.2
CDC27-216ENST00000574304 A0A1W2PRB8 838 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 OR2A25A4D2G3 310 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 PRR32B1ATL7 298 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 SH3BP5O60239 455 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 CREG1O75629 220 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 ZNF883P0CG24 379 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 GCH1P30793 250 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 SIRPAP78324 504 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 KCNJ10P78508 379 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 GRTP1Q5TC63 336 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 TMCO3Q6UWJ1 677 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 LINGO4Q6UY18 593 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 ZNF554Q86TJ5 538 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 LDB1Q86U70 411 aaPredicted RBP4.31□□□□□ -1.72
CDC27-216ENST00000574304 C17orf53Q8N3J3 647 aaPredicted RBP4.31□□□□□ -1.72
CDC27-216ENST00000574304 ZNF843Q8N446 348 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 PAFAH2Q99487 392 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 TRAF4Q9BUZ4 470 aaPredicted RBP4.31□□□□□ -1.72
CDC27-216ENST00000574304 SPATC1LQ9H0A9 340 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 ACKR4Q9NPB9 350 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 WSB2Q9NYS7 404 aaPredicted RBP4.31□□□□□ -1.72
CDC27-216ENST00000574304 VPS28Q9UK41 221 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 ZNF148Q9UQR1 794 aa4.31□□□□□ -1.72
CDC27-216ENST00000574304 SNED1Q8TER0 1413 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 DNM1LO00429 736 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 TSPAN9O75954 239 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 ZWINTO95229 277 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 NGFP01138 241 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 FRMD6-AS1P0C7T7 363 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 CEACAM1P13688 526 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 CEACAM8P31997 349 aaPredicted RBP4.3□□□□□ -1.72
CDC27-216ENST00000574304 CLNS1AP54105 237 aaKnown RBP4.3□□□□□ -1.72
CDC27-216ENST00000574304 LGALS3BPQ08380 585 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 ITGA9Q13797 1035 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 GTDC1Q4AE62 458 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 FFAR4Q5NUL3 377 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 ITPRIPL1Q6GPH6 555 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 POC5Q8NA72 575 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 DDHD1Q8NEL9 900 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 OR1J1Q8NGS3 322 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 HSD17B8Q92506 261 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 KIFC3Q9BVG8 833 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 OSGEPL1Q9H4B0 414 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 PSD3Q9NYI0 1048 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 TBC1D29Q9UFV1 150 aa4.3□□□□□ -1.72
CDC27-216ENST00000574304 SOS1Q07889 1333 aaPredicted RBP4.29□□□□□ -1.72
CDC27-216ENST00000574304 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
CDC27-216ENST00000574304 IGHV4-61A0A0C4DH41 118 aa4.29□□□□□ -1.72
CDC27-216ENST00000574304 E9PI62 339 aa4.29□□□□□ -1.72
CDC27-216ENST00000574304 NADKO95544 446 aaPredicted RBP4.29□□□□□ -1.72
CDC27-216ENST00000574304 EML2O95834 649 aa4.29□□□□□ -1.72
CDC27-216ENST00000574304 IGHV4-59P01825 116 aa4.29□□□□□ -1.72
CDC27-216ENST00000574304 CSH1P0DML2 217 aa4.29□□□□□ -1.72
CDC27-216ENST00000574304 CSH2P0DML3 217 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms