RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 HOMER3Q9NSC5 361 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 FAM8A1Q9UBU6 413 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 HEATR9A2RTY3 570 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 AP2A2O94973 939 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 POLBP06746 335 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 TPBGLP0DKB5 382 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 RPL22P35268 128 aaKnown RBP16.86■□□□□ 0.29
SMG6-212ENST00000573153 ABHD18Q0P651 414 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 SNX1Q13596 522 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 SEPT6Q14141 434 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 KCNAB1Q14722 419 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 ZRANB3Q5FWF4 1079 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 PACS1Q6VY07 963 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 CFAP206Q8IYR0 622 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 ZDHHC12Q96GR4 267 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 CCM2Q9BSQ5 444 aa16.86■□□□□ 0.29
SMG6-212ENST00000573153 SPENQ96T58 3664 aaKnown RBP16.86■□□□□ 0.29
SMG6-212ENST00000573153 EIF4E1BA6NMX2 242 aaKnown RBP16.85■□□□□ 0.29
SMG6-212ENST00000573153 NKX2-8O15522 239 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 GAS8O95995 478 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 SLC35G4P0C7Q5 338 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 ADRA1DP25100 572 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 MSNP26038 577 aaKnown RBP16.85■□□□□ 0.29
SMG6-212ENST00000573153 MAP4P27816 1152 aaKnown RBP16.85■□□□□ 0.29
SMG6-212ENST00000573153 PREPP48147 710 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 PPM1FP49593 454 aaPredicted RBP16.85■□□□□ 0.29
SMG6-212ENST00000573153 ITIH4Q14624 930 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 IL11RAQ14626 422 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMG6-212ENST00000573153 TSTD2Q5T7W7 516 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 FBXO38Q6PIJ6 1188 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 NLRP9Q7RTR0 991 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 RASGEF1CQ8N431 466 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 D2HGDHQ8N465 521 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 IL22RA1Q8N6P7 574 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 DNAAF3Q8N9W5 541 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 UBXN4Q92575 508 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 VPS37BQ9H9H4 285 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 AKIRIN1Q9H9L7 192 aaPredicted RBP16.85■□□□□ 0.29
SMG6-212ENST00000573153 WDR70Q9NW82 654 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 POMT2Q9UKY4 750 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 TTC7AQ9ULT0 858 aaPredicted RBP16.85■□□□□ 0.29
SMG6-212ENST00000573153 JRKLQ9Y4A0 524 aa16.85■□□□□ 0.29
SMG6-212ENST00000573153 TLN1Q9Y490 2541 aaKnown RBP16.84■□□□□ 0.29
SMG6-212ENST00000573153 SLC5A10A0PJK1 596 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 TLCD2A6NGC4 264 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 E7EVH7 732 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 QSOX1O00391 747 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 BTN3A3O00478 584 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 CEP104O60308 925 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 SPAG6O75602 509 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 APRTP07741 180 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 FAM87AP0C7U9 286 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 EBLN1P0CF75 366 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 ACADLP28330 430 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 OAS2P29728 719 aaKnown RBP16.84■□□□□ 0.29
SMG6-212ENST00000573153 NSG1P42857 185 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 ARCN1P48444 511 aaKnown RBP16.84■□□□□ 0.29
SMG6-212ENST00000573153 FOXM1Q08050 763 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 RPA4Q13156 261 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 BOP1Q14137 746 aaKnown RBP16.84■□□□□ 0.29
SMG6-212ENST00000573153 KLHL35Q6PF15 583 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 PPP1R21Q6ZMI0 780 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 PRELID2Q8N945 189 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 LKAAEAR1Q8TD35 194 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 CD180Q99467 661 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 STARD5Q9NSY2 213 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 HRASLS2Q9NWW9 162 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 BTRCQ9Y297 605 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 HEBP2Q9Y5Z4 205 aa16.84■□□□□ 0.29
SMG6-212ENST00000573153 MRPS18BQ9Y676 258 aaKnown RBP16.84■□□□□ 0.29
SMG6-212ENST00000573153 OR6C74A6NCV1 312 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 BHMG1C9JSJ3 638 aaPredicted RBP16.83■□□□□ 0.28
SMG6-212ENST00000573153 AP3B1O00203 1094 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 OR1I1O60431 355 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 RASSF9O75901 435 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 KIAA0754O94854 1291 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 GOT2P00505 430 aaKnown RBP16.83■□□□□ 0.28
SMG6-212ENST00000573153 NDUFS1P28331 727 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 CD151P48509 253 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 LMAN1P49257 510 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 CDK16Q00536 496 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 PLCL1Q15111 1095 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 ZNF789Q5FWF6 425 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 ATP1A1-AS1Q5TC04 95 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 LYPLAL1Q5VWZ2 237 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 PWWP2BQ6NUJ5 590 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 TAS2R42Q7RTR8 314 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 KMT5CQ86Y97 462 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 ESX1Q8N693 406 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 GALNT6Q8NCL4 622 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 ACVR1CQ8NER5 493 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 OR52E1Q8NGJ3 308 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 FLVCR1-AS1Q8TAF5 88 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 HDAC10Q969S8 669 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 ZNF501Q96CX3 271 aaPredicted RBP16.83■□□□□ 0.28
SMG6-212ENST00000573153 PITPNM3Q9BZ71 974 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 ULBP3Q9BZM4 244 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 TREX1Q9NSU2 369 aa16.83■□□□□ 0.28
SMG6-212ENST00000573153 CDYLQ9Y232 598 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms