RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 XRCC1P18887 633 aaPredicted RBP15.46■□□□□ 0.07
CHD3-215ENST00000572750 PDHA2P29803 388 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 CSF2RBP32927 897 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 MAPK9P45984 424 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 GPR3P46089 330 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 PPM1FP49593 454 aaPredicted RBP15.46■□□□□ 0.07
CHD3-215ENST00000572750 CSE1LP55060 971 aaKnown RBP15.46■□□□□ 0.07
CHD3-215ENST00000572750 MPP1Q00013 466 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 CTBP1Q13363 440 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 HSP90AA5PQ58FG0 334 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 ZNF789Q5FWF6 425 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 SPANXN3Q5MJ09 141 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 CTSL3PQ5NE16 218 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 PTRHD1Q6GMV3 140 aaKnown RBP15.46■□□□□ 0.07
CHD3-215ENST00000572750 CCNI2Q6ZMN8 369 aaPredicted RBP15.46■□□□□ 0.07
CHD3-215ENST00000572750 UNC5AQ6ZN44 842 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 CENPUQ71F23 418 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 TMPRSS9Q7Z410 1059 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 B3GNT8Q7Z7M8 397 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 SDCCAG8Q86SQ7 713 aaPredicted RBP15.46■□□□□ 0.07
CHD3-215ENST00000572750 C12orf66Q96MD2 445 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 INSM2Q96T92 566 aaPredicted RBP15.46■□□□□ 0.07
CHD3-215ENST00000572750 NUDT22Q9BRQ3 303 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 NAT9Q9BTE0 207 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 TBC1D10AQ9BXI6 508 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 FOXP3Q9BZS1 431 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 OR52A5Q9H2C5 316 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 FBXO6Q9NRD1 293 aaPredicted RBP15.46■□□□□ 0.07
CHD3-215ENST00000572750 POT1Q9NUX5 634 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 SLC17A6Q9P2U8 582 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 GNPTGQ9UJJ9 305 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 ACSL5Q9ULC5 683 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 CRYL1Q9Y2S2 319 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 FAM169AQ9Y6X4 670 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 PIEZO2Q9H5I5 2752 aa15.46■□□□□ 0.06
CHD3-215ENST00000572750 UNC13CQ8NB66 2214 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 E7ESA3 106 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 ERVK-10P10266 1014 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 FMO4P31512 558 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 PLTPP55058 493 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 GPR18Q14330 331 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 ZDHHC24Q6UX98 284 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 ZBED8Q8IZ13 594 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 MMGT1Q8N4V1 131 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 AVL9Q8NBF6 648 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 FBXO36Q8NEA4 188 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 WDR48Q8TAF3 677 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 FBXO25Q8TCJ0 367 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 JPH3Q8WXH2 748 aaPredicted RBP15.45■□□□□ 0.06
CHD3-215ENST00000572750 FAM136AQ96C01 138 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 LRRC39Q96DD0 335 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 CERS2Q96G23 380 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 FAM167BQ9BTA0 163 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 CCDC86Q9H6F5 360 aaKnown RBP15.45■□□□□ 0.06
CHD3-215ENST00000572750 SLC40A1Q9NP59 571 aa15.45■□□□□ 0.06
CHD3-215ENST00000572750 IARS2Q9NSE4 1012 aaKnown RBP15.45■□□□□ 0.06
CHD3-215ENST00000572750 URB1O60287 2271 aaKnown RBP15.44■□□□□ 0.06
CHD3-215ENST00000572750 LILRA5A6NI73 299 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 LIN7AO14910 233 aaPredicted RBP15.44■□□□□ 0.06
CHD3-215ENST00000572750 DUX1O43812 170 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 NIPSNAP2O75323 286 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 GSTM1P09488 218 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 RPS3P23396 243 aaKnown RBP eCLIP15.44■□□□□ 0.06
CHD3-215ENST00000572750 CD1CP29017 333 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 CCR7P32248 378 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 GUCY2DQ02846 1103 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 GSTM4Q03013 218 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 C19orf57Q0VDD7 668 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 ISXQ2M1V0 245 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 STEAP4Q687X5 459 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 CAPRIN2Q6IMN6 1127 aaKnown RBP15.44■□□□□ 0.06
CHD3-215ENST00000572750 TRMT10BQ6PF06 316 aaKnown RBP15.44■□□□□ 0.06
CHD3-215ENST00000572750 CAPN12Q6ZSI9 719 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 TMEM26Q6ZUK4 368 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 USP53Q70EK8 1073 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 LRRC6Q86X45 466 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 ART4Q93070 314 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 SH3KBP1Q96B97 665 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 ATXN7L3BQ96GX2 97 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 BIRC8Q96P09 236 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 TCF12Q99081 682 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 CARD6Q9BX69 1037 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 TSSK1BQ9BXA7 367 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 EPB41L5Q9HCM4 733 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 SAYSD1Q9NPB0 183 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 PPANQ9NQ55 473 aaKnown RBP15.44■□□□□ 0.06
CHD3-215ENST00000572750 INTS10Q9NVR2 710 aaKnown RBP15.44■□□□□ 0.06
CHD3-215ENST00000572750 KIF26BQ2KJY2 2108 aa15.44■□□□□ 0.06
CHD3-215ENST00000572750 SLC5A10A0PJK1 596 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 F8W8V4 182 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 AGRPO00253 132 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 PFDN6O15212 129 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 CPNE6O95741 557 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 S1PR4O95977 384 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 EPHA4P54764 986 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 GPLD1P80108 840 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 CFHR1Q03591 330 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 HSPA14Q0VDF9 509 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 RPA4Q13156 261 aa15.43■□□□□ 0.06
CHD3-215ENST00000572750 CAMK2BQ13554 666 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms