RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PPP2R2BQ00005 443 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 FAM174BQ3ZCQ3 159 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 MORN1Q5T089 497 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 FRA10AC1Q70Z53 315 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 TAS2R42Q7RTR8 314 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 PHACTR4Q8IZ21 702 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 LGI2Q8N0V4 545 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 PAK1IP1Q9NWT1 392 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-205ENST00000571272 PCDHGA4Q9Y5G9 962 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 PATJQ8NI35 1801 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 FAM92AA1XBS5 289 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 FFAR3O14843 346 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 GPR42O15529 346 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 ZNF623O75123 536 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 GUCA1CO95843 209 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 TYMPP19971 482 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 KCNQ1P51787 676 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 TAF10Q12962 218 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 SPIDRQ14159 915 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 TAF1AQ15573 450 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-205ENST00000571272 GOLGA7Q7Z5G4 137 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 SLC13A3Q8WWT9 602 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 NCLNQ969V3 563 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 TAMM41Q96BW9 452 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 CINPQ9BW66 212 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-205ENST00000571272 ZFP14Q9HCL3 533 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCARF1-205ENST00000571272 AASSQ9UDR5 926 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 RIMKLBQ9ULI2 386 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 PRG3Q9Y2Y8 225 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-205ENST00000571272 LOC100130705A0A1B0GUX0 176 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 OR7A17O14581 309 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 HPRP00739 348 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 PRLP01236 227 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 HOXD9P28356 352 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-205ENST00000571272 ALDH4A1P30038 563 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 GTDC1Q4AE62 458 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 ZNF548Q8NEK5 533 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-205ENST00000571272 CNIH3Q8TBE1 160 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 NODALQ96S42 347 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 ZNF347Q96SE7 839 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 INVSQ9Y283 1065 aa17.18■□□□□ 0.34
SCARF1-205ENST00000571272 GP2P55259 537 aaKnown RBP17.17■□□□□ 0.34
SCARF1-205ENST00000571272 OCA2Q04671 838 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 CYP4F3Q08477 520 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 SGO1Q5FBB7 561 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 NCCRP1Q6ZVX7 275 aaPredicted RBP17.17■□□□□ 0.34
SCARF1-205ENST00000571272 MUL1Q969V5 352 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 FEM1AQ9BSK4 669 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 CCSER2Q9H7U1 834 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 GORASP2Q9H8Y8 452 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 GBF1Q92538 1859 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 TMEM247A6NEH6 219 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 CLDN25C9JDP6 229 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 SLC1A7O00341 560 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 ITGB6P18564 788 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 TACR2P21452 398 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 LPOP22079 712 aaPredicted RBP17.17■□□□□ 0.34
SCARF1-205ENST00000571272 JAK1P23458 1154 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 ISL1P61371 349 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 HMGCS1Q01581 520 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 KCNC4Q03721 635 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 GTF2H2Q13888 395 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 BTG3Q14201 252 aaPredicted RBP17.17■□□□□ 0.34
SCARF1-205ENST00000571272 MAPKAPK3Q16644 382 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 GTF2H2CQ6P1K8 395 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 GCNT7Q6ZNI0 430 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 OR8J3Q8NGG0 315 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 GTF2H4Q92759 462 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 RBM4BQ9BQ04 359 aaKnown RBP17.17■□□□□ 0.34
SCARF1-205ENST00000571272 MGME1Q9BQP7 344 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 RBM4Q9BWF3 364 aaKnown RBP17.17■□□□□ 0.34
SCARF1-205ENST00000571272 IPPKQ9H8X2 491 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 ENPP5Q9UJA9 477 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 PCDHB8Q9UN66 801 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 CPQQ9Y646 472 aa17.17■□□□□ 0.34
SCARF1-205ENST00000571272 KRBA1A5PL33 1030 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 CXCR6O00574 342 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 HALP42357 657 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 HSPA7P48741 367 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 GSTM4Q03013 218 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 SPANXN4Q5MJ08 99 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 MILR1Q7Z6M3 343 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 SLCO6A1Q86UG4 719 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 KRTCAP2Q8N6L1 136 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 CLHC1Q8NHS4 586 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 CCDC97Q96F63 343 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-205ENST00000571272 PCDH12Q9NPG4 1184 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 FARSBQ9NSD9 589 aaKnown RBP17.16■□□□□ 0.34
SCARF1-205ENST00000571272 SLC25A37Q9NYZ2 338 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 B3GNT3Q9Y2A9 372 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 ELOVL7A1L3X0 281 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 TRIM43BA6NCK2 446 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 GRXCR2A6NFK2 248 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 INSIG1O15503 277 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 GDF5P43026 501 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 MAPKAPK2P49137 400 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 TTPAP49638 278 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 TRIM32Q13049 653 aa17.16■□□□□ 0.34
SCARF1-205ENST00000571272 LAPTM4AQ15012 233 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms