RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SLC16A5O15375 505 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GAGE7O76087 117 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GJB5O95377 273 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 CH25HO95992 272 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 VTNP04004 478 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GAGE12FP0CL80 117 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GAGE12GP0CL81 117 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GAGE12IP0CL82 117 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GHRP10912 638 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 SLC2A4P14672 509 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 SYT1P21579 422 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 RPA1P27694 616 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 CHATP28329 748 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 PGM1P36871 562 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 CCT6AP40227 531 aaKnown RBP4.05□□□□□ -1.76
NUP88-202ENST00000570937 UBA7P41226 1012 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 CLCN5P51795 746 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 NLRP11P59045 1033 aaKnown RBP4.05□□□□□ -1.76
NUP88-202ENST00000570937 ECT2LQ008S8 904 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GRSF1Q12849 480 aaKnown RBP eCLIP4.05□□□□□ -1.76
NUP88-202ENST00000570937 GAGE1Q13065 139 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GAGE4Q13068 117 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 BECN1Q14457 450 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GPNMBQ14956 572 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 HSPB2Q16082 182 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 TAF12Q16514 161 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 UGCGQ16739 394 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 IZUMO4Q1ZYL8 232 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 SOWAHAQ2M3V2 549 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 ESCO2Q56NI9 601 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 ZNF766Q5HY98 468 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 ZNF667Q5HYK9 610 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 SERTAD4-AS1Q5TG53 156 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 SPSB3Q6PJ21 355 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 SLC24A5Q71RS6 500 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 ANO5Q75V66 913 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 ZNF410Q86VK4 478 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 TMTC1Q8IUR5 882 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 LURAP1LQ8IV03 231 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 ZNF114Q8NC26 417 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 C11orf65Q8NCR3 313 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 ARRDC2Q8TBH0 407 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 PSPC1Q8WXF1 523 aaKnown RBP4.05□□□□□ -1.76
NUP88-202ENST00000570937 RSPH1Q8WYR4 309 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 TOP1MTQ969P6 601 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 MAELQ96JY0 434 aaKnown RBP4.05□□□□□ -1.76
NUP88-202ENST00000570937 AK8Q96MA6 479 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 DUX5Q96PT3 197 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 C1QTNF4Q9BXJ3 329 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 INTS2Q9H0H0 1204 aaKnown RBP4.05□□□□□ -1.76
NUP88-202ENST00000570937 NT5C3AQ9H0P0 336 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 GAREM1Q9H706 876 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 OCIAD1Q9NX40 245 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 IL1RAPL1Q9NZN1 696 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 LUZP4Q9P127 313 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 KIAA1456Q9P272 454 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 SUCLA2Q9P2R7 463 aaPredicted RBP4.05□□□□□ -1.76
NUP88-202ENST00000570937 PEMTQ9UBM1 199 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 SLC25A10Q9UBX3 287 aaPredicted RBP4.05□□□□□ -1.76
NUP88-202ENST00000570937 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.05□□□□□ -1.76
NUP88-202ENST00000570937 PADI3Q9ULW8 664 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 PAM16Q9Y3D7 125 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 A3GALT2U3KPV4 340 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 LTBP2Q14767 1821 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 CEP290O15078 2479 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 SCN5AQ14524 2016 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 PHLPP2Q6ZVD8 1323 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 IGLV5-37A0A075B6J1 123 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 ARHGEF35A5YM69 484 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 TAF4O00268 1085 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 STX6O43752 255 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 ATP2C2O75185 946 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 RGS11O94810 467 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 ERLIN2O94905 339 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 NDUFB4O95168 129 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 STBD1O95210 358 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 URODP06132 367 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CA3P07451 260 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 IGHV4-30-4P0DP06 118 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 DARSP14868 501 aaKnown RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 FOSL2P15408 326 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CD52P31358 61 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 LONP1P36776 959 aaKnown RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 GPC3P51654 580 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CLCN3P51790 818 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 EFNA5P52803 228 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CLDN2P57739 230 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 RPL36AP83881 106 aaKnown RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 EFNB1P98172 346 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 POU5F1BQ06416 359 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 MGAT3Q09327 533 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 LAMTOR4Q0VGL1 99 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 COASYQ13057 564 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 RUNX2Q13950 521 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 BTG3Q14201 252 aaPredicted RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 EMC2Q15006 297 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 PLA2G4FQ68DD2 849 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CATSPER4Q7RTX7 472 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 TADA2BQ86TJ2 420 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CATSPER3Q86XQ3 398 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms