RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 MRPL14Q6P1L8 145 aaKnown RBP10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 MTFR2Q6P444 385 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 TMEM207Q6UWW9 146 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 TMC3Q7Z5M5 1100 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 CHTF18Q8WVB6 975 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 MTFMTQ96DP5 389 aaKnown RBP10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 AGPAT1Q99943 283 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 TAS2R14Q9NYV8 317 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 NDOR1Q9UHB4 597 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 SH3BGRL2Q9UJC5 107 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 FBXL4Q9UKA2 621 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
CTDNEP1-202ENST00000570380 TMEM191CA6NGB0 347 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 H3BMH7 237 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 MATN3O15232 486 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 FAM155BO75949 473 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 KLHL18O94889 574 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 UNC5CO95185 931 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 SLC4A1P02730 911 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 HLA-DQB2P05538 268 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 CD63P08962 238 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 TCF4P15884 667 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 PRDX3P30048 256 aaKnown RBP10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 SERPINB6P35237 376 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 ZNF165P49910 485 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 DCDP81605 110 aaKnown RBP10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 SRSF11Q05519 484 aaKnown RBP10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 GTF2H3Q13889 308 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 SLC9A5Q14940 896 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 SYCP1Q15431 976 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 ATP13A5Q4VNC0 1218 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 METRNLQ641Q3 311 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 LINC00696Q6ZRV3 163 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 LRRC49Q8IUZ0 686 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 CEP97Q8IW35 865 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 RASGEF1AQ8N9B8 481 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 OR4E2Q8NGC2 313 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 OR1N1Q8NGS0 311 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 ZFPM2Q8WW38 1151 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 MAGEB10Q96LZ2 347 aaPredicted RBP10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 VPS35Q96QK1 796 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 SPOCK3Q9BQ16 436 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 KLHL25Q9H0H3 589 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 WWP1Q9H0M0 922 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 EPS8L2Q9H6S3 715 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 KIR3DX1Q9H7L2 352 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 RAD18Q9NS91 495 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 PARVAQ9NVD7 372 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 IFT80Q9P2H3 777 aaPredicted RBP10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 AMACRQ9UHK6 382 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 HCFC1P51610 2035 aa10.1□□□□□ -0.79
CTDNEP1-202ENST00000570380 HCRTR1O43613 425 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 ATP1A3P13637 1013 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 PVRP15151 417 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 HLA-DPA1P20036 260 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 AGAP20933 346 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 MST1P26927 711 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 CD86P42081 329 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 GALNT2Q10471 571 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 PRKAA1Q13131 559 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 RHBDD2Q6NTF9 364 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 ISLR2Q6UXK2 745 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 CDHR3Q6ZTQ4 885 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 GPR135Q8IZ08 494 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 MLKLQ8NB16 471 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 SPDYE1Q8NFV5 336 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 GDAP1Q8TB36 358 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 BRSK1Q8TDC3 778 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 LRRN4Q8WUT4 740 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 HSPH1Q92598 858 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 C12orf66Q96MD2 445 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 NRTNQ99748 197 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 ADGRE3Q9BY15 652 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 PITPNM3Q9BZ71 974 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 LHPPQ9H008 270 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 SPRTNQ9H040 489 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 ENKD1Q9H0I2 346 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 MAGEE1Q9HCI5 957 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 SEMA3GQ9NS98 782 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 TAB2Q9NYJ8 693 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 DHCR7Q9UBM7 475 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 ZNF711Q9Y462 761 aa10.09□□□□□ -0.79
CTDNEP1-202ENST00000570380 FAM221AA4D161 298 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 GSAPA4D1B5 854 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 OR2AG2A6NM03 316 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 MATN2O00339 956 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 SOCS6O14544 535 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 AURKAO14965 403 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 MFSD11O43934 449 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 GADD45BO75293 160 aaPredicted RBP10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 OR2B3O76000 313 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 CLDN14O95500 239 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 CTSBP07858 339 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 RARAP10276 462 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 DRD2P14416 443 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 MMP11P24347 488 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 CCNCP24863 283 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 PBLDP30039 288 aaPredicted RBP10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 MFAP5Q13361 173 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms