RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 PSTKQ8IV42 348 aaKnown RBP7.13□□□□□ -1.27
CNOT1-222ENST00000570139 MMGT1Q8N4V1 131 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 EXD1Q8NHP7 514 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 UBA3Q8TBC4 463 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 MYLPFQ96A32 169 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 KLHL29Q96CT2 875 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 RNF31Q96EP0 1072 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 TRMT61AQ96FX7 289 aaKnown RBP7.13□□□□□ -1.27
CNOT1-222ENST00000570139 WDYHV1Q96HA8 205 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 ZNF558Q96NG5 402 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 PKMYT1Q99640 499 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 CINPQ9BW66 212 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-222ENST00000570139 GPR87Q9BY21 358 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 MEGF9Q9H1U4 602 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 GALNT9Q9HCQ5 603 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.13□□□□□ -1.27
CNOT1-222ENST00000570139 ARGLU1Q9NWB6 273 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-222ENST00000570139 MARCH5Q9NX47 278 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 DNAJB4Q9UDY4 337 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 CHST2Q9Y4C5 530 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 NME7Q9Y5B8 376 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 COPG1Q9Y678 874 aaKnown RBP7.13□□□□□ -1.27
CNOT1-222ENST00000570139 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-222ENST00000570139 ALPK3Q96L96 1907 aa7.13□□□□□ -1.27
CNOT1-222ENST00000570139 TRGV11A0A075B6L2 103 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 MYBPHLA2RUH7 354 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 C2CD4BA6NLJ0 364 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 TMEM110-MUSTN1A8MSY1 372 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 CAPN14A8MX76 684 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 MYO1GB0I1T2 1018 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 ZNF487B1APH4 448 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 PAPSS1O43252 624 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 CEP104O60308 925 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 NOBOXO60393 691 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 GJB3O75712 270 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 ZNF189O75820 626 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 FGBP02675 491 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 ELANEP08246 267 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 PDGFRAP16234 1089 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 TKTP29401 623 aaKnown RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 RFC1P35251 1148 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 MATKP42679 507 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 RPS6KA3P51812 740 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 SLURP1P55000 103 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 YWHAZP63104 245 aaKnown RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 PRAMEP78395 509 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 MRPS5P82675 430 aaKnown RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 TXNL4AP83876 142 aaKnown RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 ADIGQ0VDE8 80 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 AIMP2Q13155 320 aaKnown RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 GPR17Q13304 367 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 MTA1Q13330 715 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 DNASE1L3Q13609 305 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 ALKBH1Q13686 389 aaKnown RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 BTG3Q14201 252 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 TCTN1Q2MV58 587 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 BOLA3Q53S33 107 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 SPOUT1Q5T280 376 aaKnown RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 FAM171A1Q5VUB5 890 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 B3GNTL1Q67FW5 361 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 FAM83HQ6ZRV2 1179 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 PAQR9Q6ZVX9 377 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 STRADAQ7RTN6 431 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 PIGZQ86VD9 579 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 MON1AQ86VX9 555 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 DNAAF5Q86Y56 855 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 TMPRSS6Q8IU80 811 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 MAP7D3Q8IWC1 876 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 RNF168Q8IYW5 571 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 RCOR2Q8IZ40 523 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 ARHGAP18Q8N392 663 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 FRMD1Q8N878 549 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 ENDOVQ8N8Q3 282 aaKnown RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 SPATA4Q8NEY3 305 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 HASPINQ8TF76 798 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 CLEC4CQ8WTT0 213 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 TEKT4Q8WW24 435 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 IGSF21Q96ID5 467 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 CAPZA3Q96KX2 299 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 PIP5K1AQ99755 562 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 RTP3Q9BQQ7 232 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 KRTAP4-2Q9BYR5 136 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 FRMD8P1Q9BZ68 369 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 CTDSP1Q9GZU7 261 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 FBXO44Q9H4M3 255 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 CDCP1Q9H5V8 836 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 SLITRK6Q9H5Y7 841 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 CWH43Q9H720 699 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 ZWILCHQ9H900 591 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 POPDC2Q9HBU9 364 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 MTRRQ9UBK8 725 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 PACSIN2Q9UNF0 486 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-222ENST00000570139 INSL6Q9Y581 213 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 PLXNA3P51805 1871 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 KIAA1671Q9BY89 1806 aa7.12□□□□□ -1.27
CNOT1-222ENST00000570139 VWA8A3KMH1 1905 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 TEX13CA0A0J9YWL9 993 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms