RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 MRPL10Q7Z7H8 261 aaKnown RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 ZNF410Q86VK4 478 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 IQCHQ86VS3 1027 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 TMEM173Q86WV6 379 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 RNF168Q8IYW5 571 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 TMEM151AQ8N4L1 468 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 IQUBQ8NA54 791 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 CAMKVQ8NCB2 501 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 TSPAN14Q8NG11 270 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 RP9Q8TA86 221 aaKnown RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 SPATA20Q8TB22 786 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 BICD2Q8TD16 824 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 CCDC12Q8WUD4 166 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 FAM168AQ92567 244 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 FKBP10Q96AY3 582 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 LENG9Q96B70 501 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 ARSGQ96EG1 525 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 IGSF21Q96ID5 467 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 RIT2Q99578 217 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 SEPT5Q99719 369 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 FERMT1Q9BQL6 677 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 MGME1Q9BQP7 344 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 RTP3Q9BQQ7 232 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 ALOXE3Q9BYJ1 711 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 KRTAP4-8Q9BYQ9 185 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 LRRC2Q9BYS8 371 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 GCOM2Q9BZD3 368 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 ZMYND12Q9H0C1 365 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 XYLT2Q9H1B5 865 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 MFSD1Q9H3U5 465 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 TSPY26PQ9H489 355 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 THAP9Q9H5L6 903 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 C6orf50Q9HD87 102 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 TBC1D13Q9NVG8 400 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 CHCHD3Q9NX63 227 aaKnown RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 ARL15Q9NXU5 204 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 TRPM5Q9NZQ8 1165 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 AKAP7Q9P0M2 348 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 CRNNQ9UBG3 495 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 WNT16Q9UBV4 365 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 FZD4Q9ULV1 537 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 DUSP12Q9UNI6 340 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 AAR2Q9Y312 384 aaKnown RBP3.21□□□□□ -1.9
CNOT1-221ENST00000569924 NID2Q14112 1375 aa3.21□□□□□ -1.9
CNOT1-221ENST00000569924 CNTNAP2Q9UHC6 1331 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ACACBO00763 2458 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 KLF18A0A0U1RQI7 1052 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 A0A1W2PR77 199 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 GAGE12BA1L429 117 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 GAGE12HA6NDE8 117 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TCAF2A6NFQ2 919 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TRIM64CA6NLI5 447 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ANXA2P2A6NMY6 339 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 MARCH11A6NNE9 402 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 NPIPB11E5RHQ5 1161 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 CCDC188H7C350 402 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 PRYO14603 147 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 INPPL1O15357 1258 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 MSH4O15457 936 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SPRY1O43609 319 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 PI15O43692 258 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 RTN2O75298 545 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SLCO2B1O94956 709 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 STBD1O95210 358 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 GCNT3O95395 438 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 MT-CYBP00156 380 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 PENKP01210 267 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 IL1AP01583 271 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ADH4P08319 380 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 FURINP09958 794 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 RFPL3SP0C7P2 107 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SRCP12931 536 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 MMP9P14780 707 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ZFXP17010 805 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ZNF182P17025 639 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TNFRSF1AP19438 455 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 PI3P19957 117 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 AGAP20933 346 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 TGM2P21980 687 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 KLRC2P26717 231 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ITPKBP27987 946 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 CA8P35219 290 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SLC11A1P49279 550 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 METAP2P50579 478 aaKnown RBP eCLIP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ZNF84P51523 738 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 CLCN4P51793 760 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 SLC12A3P55017 1021 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 YBEYP58557 167 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 PSG6Q00889 435 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 HHEXQ03014 270 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 DMWDQ09019 674 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 LMAN2Q12907 356 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 RALGDSQ12967 914 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 RPA4Q13156 261 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 DRAP1Q14919 205 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 NONOQ15233 471 aaKnown RBP eCLIP3.2□□□□□ -1.9
CNOT1-221ENST00000569924 ANGPT1Q15389 498 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 CNGA3Q16281 694 aa3.2□□□□□ -1.9
CNOT1-221ENST00000569924 UGCGQ16739 394 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms