RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CPT1BQ92523 772 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 TEFMQ96QE5 360 aaKnown RBP12.71□□□□□ -0.37
CNOT1-220ENST00000569916 CTRCQ99895 268 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 KIFC1Q9BW19 673 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 MRM3Q9HC36 420 aaKnown RBP12.71□□□□□ -0.37
CNOT1-220ENST00000569916 APMAPQ9HDC9 416 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 FBXO8Q9NRD0 319 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 CATSPERZQ9NTU4 200 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 MARCH4Q9P2E8 410 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-220ENST00000569916 HEBP2Q9Y5Z4 205 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 IGSF10Q6WRI0 2623 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 GOLGA6L10A0A0M3HER8 536 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 OR5K3A6NET4 321 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 STMND1H3BQB6 276 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 IFRD1O00458 451 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-220ENST00000569916 LIN7AO14910 233 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-220ENST00000569916 AVILO75366 819 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 RASSF9O75901 435 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 OR56A5P0C7T3 313 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 TCP1P17987 556 aaKnown RBP12.7□□□□□ -0.38
CNOT1-220ENST00000569916 ARNTP27540 789 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 NDUFS1P28331 727 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 CD151P48509 253 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 SEPHS1P49903 392 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 SRSF6Q13247 344 aaKnown RBP12.7□□□□□ -0.38
CNOT1-220ENST00000569916 AARS2Q5JTZ9 985 aaKnown RBP12.7□□□□□ -0.38
CNOT1-220ENST00000569916 GPR155Q7Z3F1 870 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 LDB1Q86U70 411 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-220ENST00000569916 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
CNOT1-220ENST00000569916 MPP5Q8N3R9 675 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 SNRNP27Q8WVK2 155 aaKnown RBP12.7□□□□□ -0.38
CNOT1-220ENST00000569916 ELMO1Q92556 727 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 MFSD3Q96ES6 412 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 ZDHHC12Q96GR4 267 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 CCNL2Q96S94 520 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-220ENST00000569916 TTC1Q99614 292 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 ASPSCR1Q9BZE9 553 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 SEMA5BQ9P283 1151 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 SOX13Q9UN79 622 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 COLEC10Q9Y6Z7 277 aa12.7□□□□□ -0.38
CNOT1-220ENST00000569916 IGHV5-51A0A0C4DH38 117 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 SLC5A10A0PJK1 596 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 K7ENP7 123 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 CD3EAPO15446 510 aaKnown RBP12.69□□□□□ -0.38
CNOT1-220ENST00000569916 EFSO43281 561 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 PPARGP37231 505 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-220ENST00000569916 GNG11P61952 73 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 SH3BP2P78314 561 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
CNOT1-220ENST00000569916 VAC14Q08AM6 782 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 BOP1Q14137 746 aaKnown RBP12.69□□□□□ -0.38
CNOT1-220ENST00000569916 BRD3Q15059 726 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 ARHGAP40Q5TG30 622 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 CACHD1Q5VU97 1274 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 ARMC3Q5W041 872 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 ZNF449Q6P9G9 518 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 INO80CQ6PI98 192 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-220ENST00000569916 CES3Q6UWW8 571 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 CEACAM20Q6UY09 585 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 NAPRTQ6XQN6 538 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 CCDC81Q6ZN84 652 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 VASH2Q86V25 355 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 OOSP2Q86WS3 158 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 ACVR1CQ8NER5 493 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 LKAAEAR1Q8TD35 194 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 GRK7Q8WTQ7 553 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 KLHL6Q8WZ60 621 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 FERD3LQ96RJ6 166 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 SPRY4Q9C004 299 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 WDR70Q9NW82 654 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 ANAPC5Q9UJX4 755 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 AHCTF1Q8WYP5 2266 aa12.69□□□□□ -0.38
CNOT1-220ENST00000569916 LOC400499M0QZD8 3231 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 TEX51A0A1B0GUA7 166 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 OR6C74A6NCV1 312 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 TLCD2A6NGC4 264 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 BHMG1C9JSJ3 638 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 POLR1CO15160 346 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 FANCGO15287 622 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 VAPBO95292 243 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 MLNP12872 115 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 NELFEP18615 380 aaKnown RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 ACADLP28330 430 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 TTPAP49638 278 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 KRT33BQ14525 404 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 SYTL3Q4VX76 610 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 DNTTIP2Q5QJE6 756 aaKnown RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 KIAA0930Q6ICG6 404 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 NAT8LQ8N9F0 302 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 PHC3Q8NDX5 983 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 MCUQ8NE86 351 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 OR52E1Q8NGJ3 308 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 UBXN4Q92575 508 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 TFGQ92734 400 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 NKD1Q969G9 470 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 SLC41A2Q96JW4 573 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 SERPINB12Q96P63 405 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 BBC3Q96PG8 261 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 CD180Q99467 661 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms