RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 MARCKSL1P49006 195 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 PTPRCAPQ14761 206 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 BCL7AQ4VC05 210 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 ATCAYQ86WG3 371 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 TMEM126BQ8IUX1 230 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 CDKL3Q8IVW4 592 aaPredicted RBP12.8□□□□□ -0.36
SPG7-221ENST00000569720 APLFQ8IW19 511 aaPredicted RBP12.8□□□□□ -0.36
SPG7-221ENST00000569720 HEXDCQ8WVB3 486 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 LINC00615Q96LM1 132 aaPredicted RBP12.8□□□□□ -0.36
SPG7-221ENST00000569720 CCM2Q9BSQ5 444 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 KIR3DX1Q9H7L2 352 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 FANCEQ9HB96 536 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 SOHLH2Q9NX45 425 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 SLC24A2Q9UI40 661 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 FKBPLQ9UIM3 349 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 TLK1Q9UKI8 766 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 GUCA1BQ9UMX6 200 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 COL12A1Q99715 3063 aa12.8□□□□□ -0.36
SPG7-221ENST00000569720 RCCD1A6NED2 376 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 MATN2O00339 956 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 MAP3K7O43318 606 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 ZNF189O75820 626 aaPredicted RBP12.79□□□□□ -0.36
SPG7-221ENST00000569720 POLBP06746 335 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 KLK3P07288 261 aaPredicted RBP12.79□□□□□ -0.36
SPG7-221ENST00000569720 NR1D1P20393 614 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 ITGALP20701 1170 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 PTPN4P29074 926 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 HADHAP40939 763 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 OTUD4Q01804 1114 aaKnown RBP12.79□□□□□ -0.36
SPG7-221ENST00000569720 SEMA5AQ13591 1074 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 ANKRD20A2Q5SQ80 823 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 ANKRD20A1Q5TYW2 823 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 ANKRD20A3Q5VUR7 823 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 DUS1LQ6P1R4 473 aaKnown RBP12.79□□□□□ -0.36
SPG7-221ENST00000569720 ZNF449Q6P9G9 518 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 FAM199XQ6PEV8 388 aaPredicted RBP12.79□□□□□ -0.36
SPG7-221ENST00000569720 RANBP10Q6VN20 620 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 CERS6Q6ZMG9 384 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 SYVN1Q86TM6 617 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 TMEM135Q86UB9 458 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 CFAP206Q8IYR0 622 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 ACTL9Q8TC94 416 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 HM13Q8TCT9 377 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 THAP4Q8WY91 577 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 KRT35Q92764 455 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 MR1Q95460 341 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 ANKMY1Q9P2S6 941 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 FARSAQ9Y285 508 aaKnown RBP12.79□□□□□ -0.36
SPG7-221ENST00000569720 EFR3BQ9Y2G0 817 aa12.79□□□□□ -0.36
SPG7-221ENST00000569720 PIKFYVEQ9Y2I7 2098 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 CCDC66A2RUB6 948 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 CYSRT1A8MQ03 144 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 IFRD1O00458 451 aaPredicted RBP12.78□□□□□ -0.36
SPG7-221ENST00000569720 KCNN4O15554 427 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 RBP3P10745 1247 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 POLR2CP19387 275 aaPredicted RBP12.78□□□□□ -0.36
SPG7-221ENST00000569720 CDH3P22223 829 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 PSMB4P28070 264 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 ADRA1AP35348 466 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 EIF3EP60228 445 aaKnown RBP12.78□□□□□ -0.36
SPG7-221ENST00000569720 GPR19Q15760 415 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 UGT8Q16880 541 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 CAPRIN2Q6IMN6 1127 aaKnown RBP12.78□□□□□ -0.36
SPG7-221ENST00000569720 DARS2Q6PI48 645 aaKnown RBP12.78□□□□□ -0.36
SPG7-221ENST00000569720 SNX20Q7Z614 316 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 ACVR1CQ8NER5 493 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
SPG7-221ENST00000569720 CPT1BQ92523 772 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 ZNF501Q96CX3 271 aaPredicted RBP12.78□□□□□ -0.36
SPG7-221ENST00000569720 RMDN2Q96LZ7 410 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 COPS8Q99627 209 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 C19orf43Q9BQ61 176 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 TBL1YQ9BQ87 522 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 APOL2Q9BQE5 337 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 C10orf88Q9H8K7 445 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 VPS37BQ9H9H4 285 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 LZTFL1Q9NQ48 299 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 LATS2Q9NRM7 1088 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 C1GALT1Q9NS00 363 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 FEZ2Q9UHY8 353 aaPredicted RBP12.78□□□□□ -0.36
SPG7-221ENST00000569720 AMFRQ9UKV5 643 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 BTRCQ9Y297 605 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 JRKLQ9Y4A0 524 aa12.78□□□□□ -0.36
SPG7-221ENST00000569720 TNRC6AQ8NDV7 1962 aaKnown RBP12.78□□□□□ -0.36
SPG7-221ENST00000569720 RP1L1Q8IWN7 2480 aaPredicted RBP12.77□□□□□ -0.37
SPG7-221ENST00000569720 C17orf113A0A1B0GUU1 675 aa12.77□□□□□ -0.37
SPG7-221ENST00000569720 GSAPA4D1B5 854 aa12.77□□□□□ -0.37
SPG7-221ENST00000569720 AGAP14A8MT82 685 aa12.77□□□□□ -0.37
SPG7-221ENST00000569720 K7EM74 188 aa12.77□□□□□ -0.37
SPG7-221ENST00000569720 ATP1B2P14415 290 aaPredicted RBP12.77□□□□□ -0.37
SPG7-221ENST00000569720 CTNNA1P35221 906 aaKnown RBP12.77□□□□□ -0.37
SPG7-221ENST00000569720 PTPN7P35236 360 aa12.77□□□□□ -0.37
SPG7-221ENST00000569720 ARCN1P48444 511 aaKnown RBP12.77□□□□□ -0.37
SPG7-221ENST00000569720 PRLHRP49683 370 aa12.77□□□□□ -0.37
SPG7-221ENST00000569720 KPNA2P52292 529 aaKnown RBP12.77□□□□□ -0.37
SPG7-221ENST00000569720 RPS18P62269 152 aaKnown RBP12.77□□□□□ -0.37
SPG7-221ENST00000569720 TMPRSS15P98073 1019 aa12.77□□□□□ -0.37
SPG7-221ENST00000569720 XIAPP98170 497 aa12.77□□□□□ -0.37
SPG7-221ENST00000569720 SRSF1Q07955 248 aaKnown RBP eCLIP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms