RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 DUS1LQ6P1R4 473 aaKnown RBP12.11□□□□□ -0.47
SNX29-207ENST00000568949 PQLC3Q8N755 202 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 DDHD1Q8NEL9 900 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 COG1Q8WTW3 980 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 WDR77Q9BQA1 342 aaPredicted RBP12.11□□□□□ -0.47
SNX29-207ENST00000568949 WWP1Q9H0M0 922 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 SLC25A51Q9H1U9 297 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 TRABDQ9H4I3 376 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 BPIFA1Q9NP55 256 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 P4HTMQ9NXG6 502 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 ACSL5Q9ULC5 683 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 SPO11Q9Y5K1 396 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 CCDC168Q8NDH2 2452 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 MGAT4DA6NG13 374 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 OR2AG2A6NM03 316 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 E7EQ34 232 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
SNX29-207ENST00000568949 ZNF749O43361 778 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 LDB2O43679 373 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 STSP08842 583 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 SPAM1P38567 509 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 FOLR3P41439 243 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 TSFMP43897 325 aaKnown RBP12.1□□□□□ -0.47
SNX29-207ENST00000568949 ZXDCQ2QGD7 858 aaPredicted RBP12.1□□□□□ -0.47
SNX29-207ENST00000568949 ANO6Q4KMQ2 910 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 ATP13A4Q4VNC1 1196 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 B4GALNT4Q76KP1 1039 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 ZC3H18Q86VM9 953 aaKnown RBP12.1□□□□□ -0.47
SNX29-207ENST00000568949 OR4E2Q8NGC2 313 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 OR2Y1Q8NGV0 311 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 PPP4R1Q8TF05 950 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 AGAP3Q96P47 875 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 PITPNM3Q9BZ71 974 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 THAP2Q9H0W7 228 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 ZBTB20Q9HC78 741 aaPredicted RBP12.1□□□□□ -0.47
SNX29-207ENST00000568949 ATP13A2Q9NQ11 1180 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 PTRH2Q9Y3E5 179 aaKnown RBP12.1□□□□□ -0.47
SNX29-207ENST00000568949 HEBP2Q9Y5Z4 205 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 MED13LQ71F56 2210 aa12.1□□□□□ -0.47
SNX29-207ENST00000568949 PDZD2O15018 2839 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 UGT1A9O60656 530 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 CYP1A2P05177 515 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 SLC35G4P0C7Q5 338 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 PYGMP11217 842 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 ST6GAL1P15907 406 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 UGT1A6P19224 532 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 UGT1A1P22309 533 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 UGT1A4P22310 534 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 PRDX3P30048 256 aaKnown RBP12.09□□□□□ -0.47
SNX29-207ENST00000568949 PTGER4P35408 488 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 ART3Q13508 389 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 ITGA9Q13797 1035 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 LONRF2Q1L5Z9 754 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 GPRC6AQ5T6X5 926 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 MLIPQ5VWP3 458 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 GPR135Q8IZ08 494 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 ACVR1CQ8NER5 493 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
SNX29-207ENST00000568949 OR2L2Q8NH16 312 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 GRHL3Q8TE85 626 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 FAR1Q8WVX9 515 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 PTERQ96BW5 349 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 HSD3B7Q9H2F3 369 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 UGT1A7Q9HAW7 530 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 UGT1A10Q9HAW8 530 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 UGT1A8Q9HAW9 530 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 SMOXQ9NWM0 555 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 COPG2Q9UBF2 871 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 GPN3Q9UHW5 284 aaPredicted RBP12.09□□□□□ -0.47
SNX29-207ENST00000568949 NOVA2Q9UNW9 492 aaKnown RBP12.09□□□□□ -0.47
SNX29-207ENST00000568949 AP1M2Q9Y6Q5 423 aa12.09□□□□□ -0.47
SNX29-207ENST00000568949 HIVEP1P15822 2718 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 GLYATL1P3A0A0U1RQE8 302 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 A0A1W2PQJ5 194 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 MT-CYBP00156 380 aaPredicted RBP12.08□□□□□ -0.48
SNX29-207ENST00000568949 SKILP12757 684 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 PBLDP30039 288 aaPredicted RBP12.08□□□□□ -0.48
SNX29-207ENST00000568949 GJC1P36383 396 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 LMAN1P49257 510 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 AIMP2Q13155 320 aaKnown RBP12.08□□□□□ -0.48
SNX29-207ENST00000568949 KRT33BQ14525 404 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 GSE1Q14687 1217 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 PPP2R5EQ16537 467 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 CYP2A13Q16696 494 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 FNBP1LQ5T0N5 605 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 B3GNTL1Q67FW5 361 aaPredicted RBP12.08□□□□□ -0.48
SNX29-207ENST00000568949 FCRL6Q6DN72 434 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 IGFL2Q6UWQ7 119 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 FAM151BQ6UXP7 276 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 RBM43Q6ZSC3 357 aaKnown RBP12.08□□□□□ -0.48
SNX29-207ENST00000568949 GDF7Q7Z4P5 450 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 PPP1R32Q7Z5V6 425 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 SPATA22Q8NHS9 363 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 PROKR1Q8TCW9 393 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 NACC2Q96BF6 587 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 GBP5Q96PP8 586 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 RNF157Q96PX1 679 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 TRAPPC9Q96Q05 1148 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 CCM2Q9BSQ5 444 aa12.08□□□□□ -0.48
SNX29-207ENST00000568949 SRMSQ9H3Y6 488 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms