RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	XKR5	Q6UX68	686 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	PACS1	Q6VY07	963 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	PRSS42	Q7Z5A4	293 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	DTX1	Q86Y01	620 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	CARF	Q8N187	725 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	ESX1	Q8N693	406 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	CLDN19	Q8N6F1	224 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	OR4E2	Q8NGC2	313 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	GPR150	Q8NGU9	434 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	SNRNP27	Q8WVK2	155 aa	Known RBP	10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	RSC1A1	Q92681	617 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	TFG	Q92734	400 aa	Predicted RBP	10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	NKD1	Q969G9	470 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	MAGOHB	Q96A72	148 aa	Known RBP	10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	STAMBPL1	Q96FJ0	436 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	ULBP3	Q9BZM4	244 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	GPN2	Q9H9Y4	310 aa	Predicted RBP	10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	FANCE	Q9HB96	536 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	CASS4	Q9NQ75	786 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	CATSPERZ	Q9NTU4	200 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	SOHLH2	Q9NX45	425 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	POLG2	Q9UHN1	485 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	SLC24A2	Q9UI40	661 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	RARRES3	Q9UL19	164 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	SSUH2	Q9Y2M2	353 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	TCAF1	Q9Y4C2	921 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	PCDHB3	Q9Y5E6	796 aa		10.12	□□□□□ -0.79
UBR1-207	ENST00000568782	AHCTF1	Q8WYP5	2266 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	CCDC162P	A2VCL2	907 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	GSAP	A4D1B5	854 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	OR5K3	A6NET4	321 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	PGRMC1	O00264	195 aa	Known RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	KPNA5	O15131	536 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	NDUFS3	O75489	264 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	STK17B	O94768	372 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	ZBTB11	O95625	1053 aa	Predicted RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	GOT2	P00505	430 aa	Known RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	RPN2	P04844	631 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	ITGB2	P05107	769 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	APOA4	P06727	396 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	ZSCAN5DP	P0CG00	497 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	NELFE	P18615	380 aa	Known RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	CDH3	P22223	829 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	CA5A	P35218	305 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	KCNJ1	P48048	391 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	LEPR	P48357	1165 aa	Known RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	HSD11B2	P80365	405 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	BOP1	Q14137	746 aa	Known RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	TMED2	Q15363	201 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	PTRHD1	Q6GMV3	140 aa	Known RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	MRNIP	Q6NTE8	343 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	CASC4	Q6P4E1	433 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	TTC23L	Q6PF05	361 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	VASH2	Q86V25	355 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	BMPER	Q8N8U9	685 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	ASZ1	Q8WWH4	475 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	N4BP2L2	Q92802	583 aa	Predicted RBP	10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	PANX3	Q96QZ0	392 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	SLC7A5P2	Q9GIP4	190 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	OGFR	Q9NZT2	677 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	LNPEP	Q9UIQ6	1025 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	ASF1A	Q9Y294	204 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	MRFAP1	Q9Y605	127 aa		10.11	□□□□□ -0.79
UBR1-207	ENST00000568782	CELSR3	Q9NYQ7	3312 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	OR51F1	A6NGY5	319 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	ZNF891	A8MT65	544 aa	Predicted RBP	10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	C2orf74	A8MZ97	194 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	CD3EAP	O15446	510 aa	Known RBP	10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	KRT14	P02533	472 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	POLR2C	P19387	275 aa	Predicted RBP	10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	TPSB2	P20231	275 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	FOXN2	P32314	431 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	GRIA1	P42261	906 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	VPS41	P49754	854 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	ARSD	P51689	593 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	ABHD18	Q0P651	414 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	GPS1	Q13098	491 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	TUBB3	Q13509	450 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	MAP7	Q14244	749 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	BRD3	Q15059	726 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	SIX1	Q15475	284 aa	Predicted RBP	10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	TPSAB1	Q15661	275 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	KIAA1614	Q5VZ46	1190 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	ARMC3	Q5W041	872 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	DUS1L	Q6P1R4	473 aa	Known RBP	10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	LRRC8B	Q6P9F7	803 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	CCDC137	Q6PK04	289 aa	Known RBP	10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	C6orf15	Q6UXA7	325 aa	Predicted RBP	10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	PRUNE1	Q86TP1	453 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	AMIGO1	Q86WK6	493 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	PIANP	Q8IYJ0	282 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	TBC1D21	Q8IYX1	336 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	MPP5	Q8N3R9	675 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	RAB42	Q8N4Z0	105 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	OR13J1	Q8NGT2	312 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	OR8K5	Q8NH50	307 aa		10.1	□□□□□ -0.79
UBR1-207	ENST00000568782	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.1	□□□□□ -0.79

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