RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ATL1Q8WXF7 558 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 IGSF8Q969P0 613 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ACDQ96AP0 544 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 COX4I2Q96KJ9 171 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ZNF512Q96ME7 567 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SEPT5Q99719 369 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SLC29A1Q99808 456 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 EGFL8Q99944 293 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 TTPALQ9BTX7 342 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 HTATIP2Q9BUP3 242 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 THUMPD3Q9BV44 507 aaKnown RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 NTMT1Q9BV86 223 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 POLR1BQ9H9Y6 1135 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 NDFIP2Q9NV92 336 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 POLR3BQ9NW08 1133 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 DUS2Q9NX74 493 aaKnown RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 KCTD5Q9NXV2 234 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 WWOXQ9NZC7 414 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 MARCH4Q9P2E8 410 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 EGFL7Q9UHF1 273 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 PSME2Q9UL46 239 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 INVSQ9Y283 1065 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 RAI2Q9Y5P3 530 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 PATJQ8NI35 1801 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SERTM1A2A2V5 107 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 MTMR11A4FU01 709 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 NPEPPSL1A6NEC2 478 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 POM121CA8CG34 1229 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 FAM220BPB1ANY3 271 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 H0Y626 953 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 K7EPI3 171 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 FXYD1O00168 92 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 AURKAO14965 403 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 SLC22A1O15245 554 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 FFAR2O15552 330 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 RSL1D1O76021 490 aaKnown RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 CNTN5O94779 1100 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 CCNDBP1O95273 360 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 SIX3O95343 332 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 TRIM16O95361 564 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 HNRNPCP07910 306 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 SRPRAP08240 638 aaKnown RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 OR56A5P0C7T3 313 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 IMPDH2P12268 514 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 SLC2A4P14672 509 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 PFKLP17858 780 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 CR2P20023 1033 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 RYKP34925 604 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 GMPRP36959 345 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 RPL3P39023 403 aaKnown RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 NSG1P42857 185 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 TRPC1P48995 793 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 AP1S2P56377 157 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 RHOAP61586 193 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 ADARB1P78563 741 aaKnown RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 SRSF11Q05519 484 aaKnown RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 BCL2L1Q07817 233 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 ABHD18Q0P651 414 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 TWF1Q12792 350 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 GALNT3Q14435 633 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 GRB7Q14451 532 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 CBX2Q14781 532 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 ACOX1Q15067 660 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 DGUOKQ16854 277 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 AP5B1Q2VPB7 878 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 FUT11Q495W5 492 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 TIGD2Q4W5G0 525 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 TMEM207Q6UWW9 146 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 CD300LGQ6UXG3 332 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 DLK2Q6UY11 383 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 LRRC70Q7Z2Q7 622 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 TRIM46Q7Z4K8 759 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 NECAB2Q7Z6G3 386 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 SYVN1Q86TM6 617 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 ITIH5Q86UX2 942 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 PIM3Q86V86 326 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 ZCCHC7Q8N3Z6 543 aaKnown RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 CDYL2Q8N8U2 506 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 SMYD1Q8NB12 490 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 OR9I1Q8NGQ6 314 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 HMGCLL1Q8TB92 370 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 HASPINQ8TF76 798 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 IPCEF1Q8WWN9 437 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 FCGR1BQ92637 280 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 NCLNQ969V3 563 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 C12orf43Q96C57 262 aaKnown RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 TIFAQ96CG3 184 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 FAM120BQ96EK7 910 aaKnown RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 SLC47A1Q96FL8 570 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 C3orf30Q96M34 536 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 PTPN18Q99952 460 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 NPLQ9BXD5 320 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 UNKQ9C0B0 810 aaKnown RBP7.51□□□□□ -1.21
ATXN3-250ENST00000568290 KCNH6Q9H252 994 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 RAD21L1Q9H4I0 556 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 IPPKQ9H8X2 491 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 PARVBQ9HBI1 364 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 LRTM1Q9HBL6 345 aa7.51□□□□□ -1.21
ATXN3-250ENST00000568290 LATS2Q9NRM7 1088 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms