RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ZFP42Q96MM3 310 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 PTPN18Q99952 460 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 ASPSCR1Q9BZE9 553 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 SIAEQ9HAT2 523 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 EXD2Q9NVH0 621 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
COMMD4-215ENST00000566843 TAS2R13Q9NYV9 303 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 VAPAQ9P0L0 249 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 FBXO10Q9UK96 956 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 UGT2A1Q9Y4X1 527 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 ARL5AQ9Y689 179 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 HSPE1-MOB4S4R3N1 261 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 MAN1A2O60476 641 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 UPK1BO75841 260 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 SEC24AO95486 1093 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 G6PDP11413 515 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 HOXB6P17509 224 aaKnown RBP15.43■□□□□ 0.06
COMMD4-215ENST00000566843 IL1RNP18510 177 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 ALDH4A1P30038 563 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 MAP2K4P45985 399 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 MASP1P48740 699 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 DGKQP52824 942 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 CLCA4Q14CN2 919 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 SF3B4Q15427 424 aaKnown RBP eCLIP15.43■□□□□ 0.063e-6■■■■■ 28.5
COMMD4-215ENST00000566843 VARS2Q5ST30 1063 aaKnown RBP15.43■□□□□ 0.06
COMMD4-215ENST00000566843 MSANTD2Q6P1R3 559 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 GALNT13Q8IUC8 556 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 LYSMD2Q8IV50 215 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 CHPFQ8IZ52 775 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 PGBD5Q8N414 524 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 KIAA1958Q8N8K9 716 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 MOV10Q9HCE1 1003 aaKnown RBP15.43■□□□□ 0.06
COMMD4-215ENST00000566843 POLE4Q9NR33 117 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 NPEPPSL1A6NEC2 478 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 CXCR6O00574 342 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 E2F3O00716 465 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 FGF1P05230 155 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 RETP07949 1114 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 SMIM10L2AP0DMW4 78 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 SMIM10L2BP0DMW5 78 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 HAPLN1P10915 354 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-215ENST00000566843 PRKACGP22612 351 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 RCVRNP35243 200 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 NRIP1P48552 1158 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 ERVPABLB-1P60509 514 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 NCS1P62166 190 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 LSM3P62310 102 aaKnown RBP15.42■□□□□ 0.06
COMMD4-215ENST00000566843 CYP4F3Q08477 520 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 PLA2G4EQ3MJ16 856 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 TUBA3EQ6PEY2 450 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 GPR149Q86SP6 731 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 ZNF683Q8IZ20 524 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 ABI1Q8IZP0 508 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 NKAPQ8N5F7 415 aaKnown RBP15.42■□□□□ 0.06
COMMD4-215ENST00000566843 OR13C4Q8NGS5 318 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 ZNF229Q9UJW7 825 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 ERVW-1Q9UQF0 538 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 PATJQ8NI35 1801 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 ELOVL7A1L3X0 281 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 GSNP06396 782 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 BMP1P13497 986 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 SMPD1P17405 629 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 HLA-DPA1P20036 260 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 ST13P50502 369 aaKnown RBP15.42■□□□□ 0.06
COMMD4-215ENST00000566843 HK3P52790 923 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 IL5RAQ01344 420 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 IFITM2Q01629 132 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 MVKQ03426 396 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 ZNF181Q2M3W8 571 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 PAGE2Q7Z2X7 111 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 DPP9Q86TI2 863 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 AKAP14Q86UN6 197 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 RASAL3Q86YV0 1011 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 CDYL2Q8N8U2 506 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 OR10A6Q8NH74 314 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 SCAMP5Q8TAC9 235 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 BRSK1Q8TDC3 778 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 DNAJB3Q8WWF6 145 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 POP5Q969H6 163 aaKnown RBP15.42■□□□□ 0.06
COMMD4-215ENST00000566843 DACH2Q96NX9 599 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 GABARAPL1Q9H0R8 117 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 PRDM5Q9NQX1 630 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-215ENST00000566843 DCAF13Q9NV06 445 aaKnown RBP15.42■□□□□ 0.06
COMMD4-215ENST00000566843 AP3M1Q9Y2T2 418 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 PCDHB14Q9Y5E9 798 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 ORC6Q9Y5N6 252 aa15.42■□□□□ 0.06
COMMD4-215ENST00000566843 TAF4O00268 1085 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 LSM1O15116 133 aaKnown RBP15.41■□□□□ 0.06
COMMD4-215ENST00000566843 TPD52L2O43399 206 aaKnown RBP15.41■□□□□ 0.06
COMMD4-215ENST00000566843 SNAI1O95863 264 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-215ENST00000566843 RHOQP17081 205 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 PFKLP17858 780 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 KEAP1Q14145 624 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 PON2Q15165 354 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 MAPK11Q15759 364 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 CLPPQ16740 277 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-215ENST00000566843 LRIT3Q3SXY7 679 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 DUSP28Q4G0W2 176 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 PIK3R6Q5UE93 754 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 LAIR1Q6GTX8 287 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms