RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 RNF31Q96EP0 1072 aa14.6□□□□□ -0.07
RNF40-209ENST00000566703 SPATA13Q96N96 652 aa14.6□□□□□ -0.07
RNF40-209ENST00000566703 COPS8Q99627 209 aa14.6□□□□□ -0.07
RNF40-209ENST00000566703 OSBPL8Q9BZF1 889 aa14.6□□□□□ -0.07
RNF40-209ENST00000566703 C10orf88Q9H8K7 445 aa14.6□□□□□ -0.07
RNF40-209ENST00000566703 AKIRIN1Q9H9L7 192 aaPredicted RBP14.6□□□□□ -0.07
RNF40-209ENST00000566703 CRLS1Q9UJA2 301 aa14.6□□□□□ -0.07
RNF40-209ENST00000566703 SETXQ7Z333 2677 aaKnown RBP14.6□□□□□ -0.07
RNF40-209ENST00000566703 CCDC66A2RUB6 948 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 PJA2O43164 708 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 MAP3K7O43318 606 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 TJP3O95049 919 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 GSTM1P09488 218 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 RAB40ALP0C0E4 278 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 ATP1B2P14415 290 aaPredicted RBP14.59□□□□□ -0.07
RNF40-209ENST00000566703 ITGALP20701 1170 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 CTNNA2P26232 953 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 CD151P48509 253 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 GSTM4Q03013 218 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 RPA4Q13156 261 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 DENND5AQ6IQ26 1287 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 DUS1LQ6P1R4 473 aaKnown RBP14.59□□□□□ -0.07
RNF40-209ENST00000566703 ZNF449Q6P9G9 518 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 FAM199XQ6PEV8 388 aaPredicted RBP14.59□□□□□ -0.07
RNF40-209ENST00000566703 DARS2Q6PI48 645 aaKnown RBP14.59□□□□□ -0.07
RNF40-209ENST00000566703 CERS6Q6ZMG9 384 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 ATCAYQ86WG3 371 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 NXPE1Q8N323 547 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 OR4E2Q8NGC2 313 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 RMDN2Q96LZ7 410 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 APOL2Q9BQE5 337 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 VPS37BQ9H9H4 285 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 FANCEQ9HB96 536 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 MLXIPLQ9NP71 852 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 ZDHHC3Q9NYG2 299 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 POMT2Q9UKY4 750 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 PCDHGB7Q9Y5F8 929 aa14.59□□□□□ -0.07
RNF40-209ENST00000566703 PCDHGA9Q9Y5G4 932 aaKnown RBP14.59□□□□□ -0.07
RNF40-209ENST00000566703 ZNF106Q9H2Y7 1883 aaKnown RBP14.59□□□□□ -0.07
RNF40-209ENST00000566703 IGLV3-16A0A075B6K0 115 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 BTNL10A8MVZ5 291 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 H7C0S8 307 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 MEN1O00255 615 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 IFRD1O00458 451 aaPredicted RBP14.58□□□□□ -0.08
RNF40-209ENST00000566703 KCNN4O15554 427 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 POLR2CP19387 275 aaPredicted RBP14.58□□□□□ -0.08
RNF40-209ENST00000566703 NR1D1P20393 614 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 CDH3P22223 829 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 PSMB4P28070 264 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 ZNF140P52738 457 aaPredicted RBP14.58□□□□□ -0.08
RNF40-209ENST00000566703 RWDD2BP57060 319 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 GPS2Q13227 327 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 GPR19Q15760 415 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 PLEKHS1Q5SXH7 462 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 OR13C4Q8NGS5 318 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 CPT1BQ92523 772 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 MR1Q95460 341 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 FERD3LQ96RJ6 166 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 TBL1YQ9BQ87 522 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 TRIM5Q9C035 493 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 OR52A5Q9H2C5 316 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 SRMSQ9H3Y6 488 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 TFB2MQ9H5Q4 396 aaKnown RBP14.58□□□□□ -0.08
RNF40-209ENST00000566703 MVB12BQ9H7P6 319 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 SOHLH2Q9NX45 425 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 PLAAQ9Y263 795 aa14.58□□□□□ -0.08
RNF40-209ENST00000566703 EPN1Q9Y6I3 576 aaPredicted RBP14.58□□□□□ -0.08
RNF40-209ENST00000566703 TRBV5-4A0A0C4DH59 114 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 SLC9B1P1A6NJY1 282 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 LDB2O43679 373 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 PRDX3P30048 256 aaKnown RBP14.57□□□□□ -0.08
RNF40-209ENST00000566703 PARP6Q2NL67 630 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 ZNF658BQ4V348 819 aaPredicted RBP14.57□□□□□ -0.08
RNF40-209ENST00000566703 PAPD7Q5XG87 772 aaKnown RBP14.57□□□□□ -0.08
RNF40-209ENST00000566703 TMTC1Q8IUR5 882 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 DSELQ8IZU8 1212 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 FAM26EQ8N5C1 309 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 LILRA3Q8N6C8 439 aaPredicted RBP14.57□□□□□ -0.08
RNF40-209ENST00000566703 TTC13Q8NBP0 860 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 SLC38A9Q8NBW4 561 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 CCDC110Q8TBZ0 833 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 LCN9Q8WX39 176 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 PANX2Q96RD6 677 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 RUFY1Q96T51 708 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 SLC25A23Q9BV35 468 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 NLNQ9BYT8 704 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 TRIM55Q9BYV6 548 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 PITPNM3Q9BZ71 974 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 CHST8Q9H2A9 424 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 COG4Q9H9E3 785 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 ACSS2Q9NR19 701 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 FAM8A1Q9UBU6 413 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 SERTAD3Q9UJW9 196 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 TFR2Q9UP52 801 aa14.57□□□□□ -0.08
RNF40-209ENST00000566703 MACROD2A1Z1Q3 448 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 PSMD3O43242 534 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 IPO7O95373 1038 aaKnown RBP14.56□□□□□ -0.08
RNF40-209ENST00000566703 HBQ1P09105 142 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 RORAP35398 523 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 PREPP48147 710 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms