RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TMCC2O75069 709 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 ZNF217O75362 1048 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 SLC25A12O75746 678 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 GCNT3O95395 438 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 CA6P23280 308 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 ZBTB25P24278 435 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 PAX9P55771 341 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 TAS2R40P59535 323 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 TFAP4Q01664 338 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 CALCOCO2Q13137 446 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 MOGAT2Q3SYC2 334 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 ZNF534Q76KX8 674 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 PTAR1Q7Z6K3 402 aaPredicted RBP1.84□□□□□ -2.11
SMG1-212ENST00000566328 RNF168Q8IYW5 571 aaPredicted RBP1.84□□□□□ -2.11
SMG1-212ENST00000566328 GPD1LQ8N335 351 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 SAMD3Q8N6K7 520 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 TOMM40LQ969M1 308 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 SGK494Q96LW2 274 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 SPHK2Q9NRA0 654 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 TEX10Q9NXF1 929 aaPredicted RBP1.84□□□□□ -2.11
SMG1-212ENST00000566328 TRMT1Q9NXH9 659 aaKnown RBP1.84□□□□□ -2.11
SMG1-212ENST00000566328 DBNLQ9UJU6 430 aaKnown RBP1.84□□□□□ -2.11
SMG1-212ENST00000566328 GRID1Q9ULK0 1009 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 CAMK2AQ9UQM7 478 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 B3GALT5Q9Y2C3 310 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 MPTX1A8MV57 137 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 TMEM189-UBE2V1I3L0A0 370 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 J3QR06 171 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 MAGEC1O60732 1142 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 HIST1H2ABP04908 130 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 GPIP06744 558 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 SELLP14151 372 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 HIST1H2ADP20671 130 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 DRD3P35462 400 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 PSMC4P43686 418 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 ZFP36L2P47974 494 aaKnown RBP1.83□□□□□ -2.12
SMG1-212ENST00000566328 VAMP2P63027 116 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 PTP4A2Q12974 167 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 UBE2V1Q13404 147 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 EIF4EBP2Q13542 120 aaPredicted RBP1.83□□□□□ -2.12
SMG1-212ENST00000566328 LY6DQ14210 128 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 NAB2Q15742 525 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 BAK1Q16611 211 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 MEP1AQ16819 746 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 MTHFSDQ2M296 383 aaKnown RBP1.83□□□□□ -2.12
SMG1-212ENST00000566328 DPCR1Q3MIW9 517 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 LYSMD4Q5XG99 296 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 CDC73Q6P1J9 531 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 HIST3H2AQ7L7L0 130 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 GALNT5Q7Z7M9 940 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 ADCK1Q86TW2 530 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 SLC47A2Q86VL8 602 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 ABCA7Q8IZY2 2146 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 PPFIBP2Q8ND30 876 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 NUP37Q8NFH4 326 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 KBTBD8Q8NFY9 601 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 OR10G8Q8NGN5 311 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 OR8K5Q8NH50 307 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 GSDMBQ8TAX9 411 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 SMARCE1Q969G3 411 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 AZIN2Q96A70 460 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 MMABQ96EY8 250 aaPredicted RBP1.83□□□□□ -2.12
SMG1-212ENST00000566328 SLC45A3Q96JT2 553 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 EGLN2Q96KS0 407 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 PRICKLE1Q96MT3 831 aaPredicted RBP1.83□□□□□ -2.12
SMG1-212ENST00000566328 ISCA1Q9BUE6 129 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 ATP13A3Q9H7F0 1226 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 RANGRFQ9HD47 186 aaPredicted RBP1.83□□□□□ -2.12
SMG1-212ENST00000566328 PANK4Q9NVE7 773 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 CNOT8Q9UFF9 292 aaKnown RBP1.83□□□□□ -2.12
SMG1-212ENST00000566328 CAPN7Q9Y6W3 813 aa1.83□□□□□ -2.12
SMG1-212ENST00000566328 NCAPD3P42695 1498 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 ERCC6Q03468 1493 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 LOC101059948A0A1B0GTJ6 334 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 C15orf61A6NNL5 157 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 ZNF195O14628 629 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 SMAD9O15198 467 aaKnown RBP1.82□□□□□ -2.12
SMG1-212ENST00000566328 TNFSF14O43557 240 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 PLPP2O43688 288 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 GPRIN2O60269 458 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 GP9P14770 177 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 PRKACGP22612 351 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 OPRL1P41146 370 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 RARSP54136 660 aaKnown RBP1.82□□□□□ -2.12
SMG1-212ENST00000566328 F2RL1P55085 397 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 POU5F1Q01860 360 aaKnown RBP1.82□□□□□ -2.12
SMG1-212ENST00000566328 TLE2Q04725 743 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 ZFP36L1Q07352 338 aaKnown RBP1.82□□□□□ -2.12
SMG1-212ENST00000566328 GALNT2Q10471 571 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 UBE4AQ14139 1066 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 CCNG2Q16589 344 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 PRICKLE4Q2TBC4 344 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 SOWAHCQ53LP3 525 aaPredicted RBP1.82□□□□□ -2.12
SMG1-212ENST00000566328 TMEM64Q6YI46 380 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 Q6ZRP5 223 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 SEPT14Q6ZU15 432 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 CPOQ8IVL8 374 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 CCDC146Q8IYE0 955 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 TMTC2Q8N394 836 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 NFKBIDQ8NI38 313 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms