RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 FOLH1Q04609 750 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 FOXD4Q12950 439 aaPredicted RBP8.78□□□□□ -1
VPS9D1-205ENST00000565452 CLEC16AQ2KHT3 1053 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 ANKRD20A8PQ5CZ79 823 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 PPP1R15BQ5SWA1 713 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 ZNF648Q5T619 568 aaPredicted RBP8.78□□□□□ -1
VPS9D1-205ENST00000565452 HENMT1Q5T8I9 393 aaKnown RBP8.78□□□□□ -1
VPS9D1-205ENST00000565452 MARC1Q5VT66 337 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 CES4AQ5XG92 561 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 ACAD10Q6JQN1 1059 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 CRTC3Q6UUV7 619 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 LINC00696Q6ZRV3 163 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 ADGRG6Q86SQ4 1221 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 PHF13Q86YI8 300 aaPredicted RBP8.78□□□□□ -1
VPS9D1-205ENST00000565452 ARHGAP12Q8IWW6 846 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 GPR135Q8IZ08 494 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 ACBD4Q8NC06 268 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 ZFPM2Q8WW38 1151 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 NINJ1Q92982 152 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 PANX2Q96RD6 677 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 TAAR6Q96RI8 345 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 WDR24Q96S15 920 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 EIF3CQ99613 913 aaKnown RBP8.78□□□□□ -1
VPS9D1-205ENST00000565452 TREX2Q9BQ50 279 aaPredicted RBP8.78□□□□□ -1
VPS9D1-205ENST00000565452 TRIM56Q9BRZ2 755 aaKnown RBP8.78□□□□□ -1
VPS9D1-205ENST00000565452 SYT11Q9BT88 431 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 NDC1Q9BTX1 674 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 SELENOOQ9BVL4 669 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 AP1M1Q9BXS5 423 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 ARFGAP3Q9NP61 516 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 C1GALT1Q9NS00 363 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 ABHD10Q9NUJ1 306 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 ABI3Q9P2A4 366 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 FBXL4Q9UKA2 621 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 AP1M2Q9Y6Q5 423 aa8.78□□□□□ -1
VPS9D1-205ENST00000565452 TRAV17A0A0B4J275 112 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 OR6C74A6NCV1 312 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 FZD6O60353 706 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 SLC19A2O60779 497 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 PMPCBO75439 489 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CDK14O94921 469 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 C8BP07358 591 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CBSLP0DN79 551 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 ERCC2P18074 760 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CDH3P22223 829 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CES1P23141 567 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 IL4RP24394 825 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CBSP35520 551 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 NSFP46459 744 aaKnown RBP8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 ZNF143P52747 638 aaPredicted RBP8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 GSCP56915 257 aaPredicted RBP8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 ARG2P78540 354 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 ITKQ08881 620 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 PRKAA1Q13131 559 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 MFAP5Q13361 173 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 GSE1Q14687 1217 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 RPE65Q16518 533 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 PLA2G4EQ3MJ16 856 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 ZNF569Q5MCW4 686 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CXXC5Q7LFL8 322 aaKnown RBP8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 ZNF571Q7Z3V5 609 aaPredicted RBP8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 TMEM200AQ86VY9 491 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CCDC170Q8IYT3 715 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 PGBD5Q8N414 524 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 TC2NQ8N9U0 490 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 SLC30A5Q8TAD4 765 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CA5BP1Q8WTZ4 195 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 N4BP2L2Q92802 583 aaPredicted RBP8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 TRIM11Q96F44 468 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 THOC3Q96J01 351 aaKnown RBP8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CCDC42Q96M95 316 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 SMIM14Q96QK8 99 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 MGME1Q9BQP7 344 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 SPATA16Q9BXB7 569 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 ISCUQ9H1K1 167 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 DLL4Q9NR61 685 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CCM2LQ9NUG4 571 aaPredicted RBP8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 WDR37Q9Y2I8 494 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1.01
VPS9D1-205ENST00000565452 CSPG4Q6UVK1 2322 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 C1orf232A0A0U1RR37 186 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 SIGLEC16A6NMB1 481 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 KIAA1324LA8MWY0 1029 aaPredicted RBP8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 DDX3YO15523 660 aaKnown RBP8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 RASAL1O95294 804 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 MYBL1P10243 752 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 SKILP12757 684 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 MMP11P24347 488 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 MMP13P45452 471 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 KPNA2P52292 529 aaKnown RBP8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 MAXP61244 160 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 DSG2Q14126 1118 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 PCOLCEQ15113 449 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 CDSNQ15517 529 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 SLC18A3Q16572 532 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 C3AR1Q16581 482 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 ZNF789Q5FWF6 425 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 ZFYVE27Q5T4F4 411 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 ZNF385CQ66K41 422 aaPredicted RBP8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 FBXO38Q6PIJ6 1188 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms