RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ERVK-5Q9HDB9 667 aa5.03□□□□□ -1.6
SMG1-211ENST00000565324 SNTG1Q9NSN8 517 aa5.03□□□□□ -1.6
SMG1-211ENST00000565324 NWD1Q149M9 1564 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 A0A1B0GVM2 712 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 TCAF2A6NFQ2 919 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 GMFGO60234 142 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SLC19A2O60779 497 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 DUSP4Q13115 394 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 KLF10Q13118 480 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 PITRM1Q5JRX3 1037 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 ECHDC2Q86YB7 292 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CYP4X1Q8N118 509 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 PPM1MQ96MI6 270 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 FUCA2Q9BTY2 467 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 C12orf65Q9H3J6 166 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 ELAC1Q9H777 363 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 FOLH1BQ9HBA9 442 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 USP29Q9HBJ7 922 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 HHATLQ9HCP6 504 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 NEUROD4Q9HD90 331 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 FBXO5Q9UKT4 447 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 NOP16Q9Y3C1 178 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 LRRC10BA6NIK2 292 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CXCR6O00574 342 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 ALDH3B2P48448 385 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 GMPSP49915 693 aaPredicted RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 GTF2A2P52657 109 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 ZNF267Q14586 743 aaPredicted RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 TMEM119Q4V9L6 283 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CRTC2Q53ET0 693 aaPredicted RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 CYP4V2Q6ZWL3 525 aaPredicted RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 EGFL6Q8IUX8 553 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 TBC1D15Q8TC07 691 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 GEMIN6Q8WXD5 167 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 GDAP2Q9NXN4 497 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 ZNHIT2Q9UHR6 403 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 COLEC10Q9Y6Z7 277 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SCN8AQ9UQD0 1980 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 A0A1W2PQ67 120 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 NPHS1O60500 1241 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 GADD45GO95257 159 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CHMP24386 653 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SLC3A1Q07837 685 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 HLFQ16534 295 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 XKR4Q5GH76 650 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 DCDC5Q6ZRR9 648 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SPPL2CQ8IUH8 684 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 NPAS2Q99743 824 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 MMP27Q9H306 513 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 QTRT2Q9H974 415 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 CTDNEP1O95476 244 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 LATS1O95835 1130 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CHKAP35790 457 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SMSP52788 366 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 AQP4P55087 323 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 RTP1P59025 263 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 MERTKQ12866 999 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 OGFOD2Q6N063 350 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CERS6Q6ZMG9 384 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 GET4Q7L5D6 327 aaPredicted RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 SLC43A3Q8NBI5 491 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SETD6Q8TBK2 473 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 NCSTNQ92542 709 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 DNASE1L2Q92874 299 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 TM9SF2Q99805 663 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 TREX2Q9BQ50 279 aaPredicted RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 TMEM109Q9BVC6 243 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 NUSAP1Q9BXS6 441 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 MKS1Q9NXB0 559 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 KCTD5Q9NXV2 234 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 TAS2R10Q9NYW0 307 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 NUFIP1Q9UHK0 495 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 A0A1W2PRQ8 180 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 C5orf60A6NFR6 353 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 E5RJQ4 531 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CXCR3P49682 368 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 ANTXR2P58335 489 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 FASTKD3Q14CZ7 662 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 ZNF829Q3KNS6 432 aaPredicted RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 SLC30A10Q6XR72 485 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 KIAA0895Q8NCT3 520 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SMG8Q8ND04 991 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 METTL21AQ8WXB1 218 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 MSANTD3Q96H12 275 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 RHBGQ9H310 441 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SPON1Q9HCB6 807 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SLCO1B3Q9NPD5 702 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 COMMD3Q9UBI1 195 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 ZNF282Q9UDV7 671 aaPredicted RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 ARL5AQ9Y689 179 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CDH10Q9Y6N8 788 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 TTLL8A6PVC2 850 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CFL1P23528 166 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 ACVR2AP27037 513 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 GRIA2P42262 883 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 CRADDP78560 199 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 SRSF11Q05519 484 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 UBAP2Q5T6F2 1119 aaKnown RBP5.02□□□□□ -1.61
SMG1-211ENST00000565324 GPRC6AQ5T6X5 926 aa5.02□□□□□ -1.61
SMG1-211ENST00000565324 ZNF767PQ75MW2 155 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms