RNA–Protein interactions for RNA: ENST00000564969.5

FANCA-217, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 850 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-217ENST00000564969 PBLDP30039 288 aaPredicted RBP11.07□□□□□ -0.64
FANCA-217ENST00000564969 CSNK1EP49674 416 aaKnown RBP11.07□□□□□ -0.64
FANCA-217ENST00000564969 WDR4P57081 412 aaKnown RBP11.07□□□□□ -0.64
FANCA-217ENST00000564969 CTBSQ01459 385 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 ILF3Q12906 894 aaKnown RBP eCLIP11.07□□□□□ -0.64
FANCA-217ENST00000564969 SP140Q13342 867 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 NFE2L1Q14494 772 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 PEAR1Q5VY43 1037 aaPredicted RBP11.07□□□□□ -0.64
FANCA-217ENST00000564969 WASH2PQ6VEQ5 465 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 FAM83HQ6ZRV2 1179 aaPredicted RBP11.07□□□□□ -0.64
FANCA-217ENST00000564969 PIWIL4Q7Z3Z4 852 aaKnown RBP11.07□□□□□ -0.64
FANCA-217ENST00000564969 VRK3Q8IV63 474 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 CCDC63Q8NA47 563 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 ARMC2Q8NEN0 867 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 CEP76Q8TAP6 659 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 SKA2Q8WVK7 121 aaPredicted RBP11.07□□□□□ -0.64
FANCA-217ENST00000564969 ASB11Q8WXH4 323 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 PTERQ96BW5 349 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 CCDC126Q96EE4 140 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 PDXPQ96GD0 296 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 LOXL4Q96JB6 756 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 SLC12A9Q9BXP2 914 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 GSDMCQ9BYG8 508 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 TRIM54Q9BYV2 358 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 OR52A5Q9H2C5 316 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 ALG9Q9H6U8 611 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 WASH6PQ9NQA3 447 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 TM7SF3Q9NS93 570 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 SLC17A7Q9P2U7 560 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 XPR1Q9UBH6 696 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 FAM8A1Q9UBU6 413 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 DNAJC16Q9Y2G8 782 aa11.07□□□□□ -0.64
FANCA-217ENST00000564969 ZNF106Q9H2Y7 1883 aaKnown RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 TRPM6Q9BX84 2022 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 CDC7O00311 574 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 IFRD1O00458 451 aaPredicted RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 BTN3A1O00481 513 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 SMIM24O75264 130 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 HIST1H2AGP0C0S8 130 aaPredicted RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 TPBGLP0DKB5 382 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 NME1P15531 152 aaKnown RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 JUNDP17535 347 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 HIST1H2ADP20671 130 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 ACADLP28330 430 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PDHA2P29803 388 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PREPP48147 710 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 KCNC1P48547 511 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 SERPINB4P48594 390 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 ATP1A2P50993 1020 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PRKAA2P54646 552 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 IRX4P78413 519 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 IL9RQ01113 521 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 ABRQ12979 859 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 OR4D1Q15615 310 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 TSNQ15631 228 aaKnown RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 PLA2G4EQ3MJ16 856 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 TUBB8Q3ZCM7 444 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 TECRLQ5HYJ1 363 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 CDKL4Q5MAI5 379 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 CAPRIN2Q6IMN6 1127 aaKnown RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 ABRAXAS1Q6UWZ7 409 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 XKR5Q6UX68 686 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 UNC5DQ6UXZ4 953 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 SPATS2Q86XZ4 545 aaKnown RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 GPSM1Q86YR5 675 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 RASGRP3Q8IV61 690 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PHACTR4Q8IZ21 702 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 SDR16C5Q8N3Y7 309 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 LILRA3Q8N6C8 439 aaPredicted RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 MCOLN3Q8TDD5 553 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 GPBAR1Q8TDU6 330 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 SREK1Q8WXA9 508 aaKnown RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 PIGKQ92643 395 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 HIST1H2AHQ96KK5 128 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 ATOH8Q96SQ7 321 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PRRX2Q99811 253 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 HIST1H2AJQ99878 128 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 H2AFJQ9BTM1 129 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 UNKQ9C0B0 810 aaKnown RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 TMEM168Q9H0V1 697 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 C12orf65Q9H3J6 166 aaKnown RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 RDH14Q9HBH5 336 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PARVBQ9HBI1 364 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 DNAJC28Q9NX36 388 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 CPSF2Q9P2I0 782 aaKnown RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 COPG2Q9UBF2 871 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PCOLCE2Q9UKZ9 415 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PNMA8BQ9ULN7 279 aaPredicted RBP11.06□□□□□ -0.64
FANCA-217ENST00000564969 RNF112Q9ULX5 631 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 KCNK6Q9Y257 313 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PLEKHM1Q9Y4G2 1056 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 SCN8AQ9UQD0 1980 aa11.06□□□□□ -0.64
FANCA-217ENST00000564969 PABPN1LA6NDY0 278 aaKnown RBP11.05□□□□□ -0.64
FANCA-217ENST00000564969 NPEPPSL1A6NEC2 478 aa11.05□□□□□ -0.64
FANCA-217ENST00000564969 G3V2L1 256 aa11.05□□□□□ -0.64
FANCA-217ENST00000564969 POLR3GO15318 223 aaPredicted RBP11.05□□□□□ -0.64
FANCA-217ENST00000564969 PSIP1O75475 530 aaKnown RBP11.05□□□□□ -0.64
FANCA-217ENST00000564969 CATP04040 527 aaKnown RBP11.05□□□□□ -0.64
FANCA-217ENST00000564969 RPN2P04844 631 aa11.05□□□□□ -0.64
FANCA-217ENST00000564969 BPGMP07738 259 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms