RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MLXIPLQ9NP71 852 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 LATS2Q9NRM7 1088 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 IGSF5Q9NSI5 407 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 ZNF358Q9NW07 568 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 TMEM216Q9P0N5 145 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 KLHL42Q9P2K6 505 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 FAM8A1Q9UBU6 413 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 RUVBL2Q9Y230 463 aaKnown RBP10.89□□□□□ -0.67
SF3B3-205ENST00000564899 HS3ST3A1Q9Y663 406 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 TENM4Q6N022 2769 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 ASXL3Q9C0F0 2248 aa10.89□□□□□ -0.67
SF3B3-205ENST00000564899 PLXNB3Q9ULL4 1909 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 TMEM202A6NGA9 273 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 TOR1BO14657 336 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 KHNYNO15037 678 aaKnown RBP10.88□□□□□ -0.67
SF3B3-205ENST00000564899 KPNA5O15131 536 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 GRID2O43424 1007 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 PLIN3O60664 434 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 APOA4P06727 396 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 GSTM1P09488 218 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 CD1DP15813 335 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 DGKAP23743 735 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 CD27P26842 260 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 AOAHP28039 575 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 HTR1BP28222 390 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 RABIFP47224 123 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 GLRBP48167 497 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 DHPSP49366 369 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-205ENST00000564899 THOP1P52888 689 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 GYS2P54840 703 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 IL2P60568 153 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 ATP6V0D1P61421 351 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 YPEL5P62699 121 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 GSTM4Q03013 218 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 PLA2G4EQ3MJ16 856 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 CCDC153Q494R4 210 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 SYTL3Q4VX76 610 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 ACSBG2Q5FVE4 666 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 PLEKHS1Q5SXH7 462 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 HHATQ5VTY9 493 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 LRRC8EQ6NSJ5 796 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 LVRNQ6Q4G3 990 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 NAPRTQ6XQN6 538 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 LRRTM4Q86VH4 590 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 ZNF547Q8IVP9 402 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 CHCHD4Q8N4Q1 142 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 CCDC63Q8NA47 563 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 ARMC2Q8NEN0 867 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 DENND1AQ8TEH3 1009 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 PIGKQ92643 395 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 COL26A1Q96A83 441 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 UBXN10Q96LJ8 280 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 LINC00615Q96LM1 132 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-205ENST00000564899 HSPA12BQ96MM6 686 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 WDR92Q96MX6 357 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 SLC6A18Q96N87 628 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 GPR78Q96P69 363 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 PAIP2Q9BPZ3 127 aaKnown RBP10.88□□□□□ -0.67
SF3B3-205ENST00000564899 ORAI3Q9BRQ5 295 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 DERL2Q9GZP9 239 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 RMI1Q9H9A7 625 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 NMRAL1Q9HBL8 299 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 AASDHPPTQ9NRN7 309 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 INTS9Q9NV88 658 aaKnown RBP10.88□□□□□ -0.67
SF3B3-205ENST00000564899 MOSPD1Q9UJG1 213 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
SF3B3-205ENST00000564899 EMCNQ9ULC0 261 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 GPR34Q9UPC5 381 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 SLC17A4Q9Y2C5 497 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 MSRB2Q9Y3D2 182 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 GPSM3Q9Y4H4 160 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 NEUROG3Q9Y4Z2 214 aa10.88□□□□□ -0.67
SF3B3-205ENST00000564899 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 EIF3FO00303 357 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-205ENST00000564899 CHUKO15111 745 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 KMOO15229 486 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 ZBTB14O43829 449 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 POP7O75817 140 aaKnown RBP10.87□□□□□ -0.67
SF3B3-205ENST00000564899 TSPAN12O95859 305 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 PROCP04070 461 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 CEACAM5P06731 702 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 CBSLP0DN79 551 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 ENO3P13929 434 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-205ENST00000564899 TFEBP19484 476 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 CBSP35520 551 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 ETV4P43268 484 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 WDR4P57081 412 aaKnown RBP10.87□□□□□ -0.67
SF3B3-205ENST00000564899 SIM1P81133 766 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-205ENST00000564899 HSPA14Q0VDF9 509 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 GBX1Q14549 363 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 ACAP2Q15057 778 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 TRIM61Q5EBN2 209 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 TECRLQ5HYJ1 363 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 Q6ZSR6 202 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 PIWIL4Q7Z3Z4 852 aaKnown RBP10.87□□□□□ -0.67
SF3B3-205ENST00000564899 PIP4P1Q86T03 277 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 C11orf74Q86VG3 221 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 TAX1BP1Q86VP1 789 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 GALNT13Q8IUC8 556 aa10.87□□□□□ -0.67
SF3B3-205ENST00000564899 TMEFF1Q8IYR6 380 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms