RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PPP1R3DO95685 299 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 TFAP2AP05549 437 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 PLA2G2AP14555 144 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 AHRP35869 848 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 FOXG1P55316 489 aaPredicted RBP4.48□□□□□ -1.69
LINC00560-201ENST00000564593 PRKAA1Q13131 559 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 PTPRCAPQ14761 206 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 NDUFAF5Q5TEU4 345 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 PLXDC2Q6UX71 529 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 MEPCEQ7L2J0 689 aaKnown RBP4.48□□□□□ -1.69
LINC00560-201ENST00000564593 ZDHHC17Q8IUH5 632 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 SAMD14Q8IZD0 417 aaPredicted RBP4.48□□□□□ -1.69
LINC00560-201ENST00000564593 SLC4A11Q8NBS3 891 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 MOSPD2Q8NHP6 518 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 KIF18AQ8NI77 898 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 LNX1Q8TBB1 728 aaPredicted RBP4.48□□□□□ -1.69
LINC00560-201ENST00000564593 DAZLQ92904 295 aaKnown RBP4.48□□□□□ -1.69
LINC00560-201ENST00000564593 SLAMF9Q96A28 289 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 SPDL1Q96EA4 605 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 SIPA1Q96FS4 1042 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 ABHD8Q96I13 439 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 IGSF21Q96ID5 467 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 FER1L6-AS2Q96M78 137 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 DUX5Q96PT3 197 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 SEPHS2Q99611 448 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 WACQ9BTA9 647 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 EBF2Q9HAK2 575 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 PFDN4Q9NQP4 134 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 OSER1Q9NX31 292 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 DPP3Q9NY33 737 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 GRIP1Q9Y3R0 1128 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 A0A1W2PPM1 405 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 PLSCR5A0PG75 271 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 C5orf60A6NFR6 353 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 MEIS2O14770 477 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 SLC28A2O43868 658 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 LIPFP07098 398 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 OR2T7P0C7T2 308 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 DANCRP0C864 163 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 SCG2P13521 617 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 FDPSP14324 419 aaKnown RBP4.47□□□□□ -1.69
LINC00560-201ENST00000564593 ZNF23P17027 643 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 ACHEP22303 614 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 MTHFRP42898 656 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 CCR10P46092 362 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 SLC9A3P48764 834 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 MMP15P51511 669 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 TFCP2Q12800 502 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 FHL1Q13642 323 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 KEAP1Q14145 624 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 VWC2Q2TAL6 325 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 STXBP5Q5T5C0 1151 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 C9orf57Q5W0N0 161 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 FAM198BQ6UWH4 519 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 PRSS57Q6UWY2 283 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 TUBA1AQ71U36 451 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 ANKRD23Q86SG2 305 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 CAMKVQ8NCB2 501 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 IL17FQ96PD4 163 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 RAB3IPQ96QF0 476 aaPredicted RBP4.47□□□□□ -1.69
LINC00560-201ENST00000564593 MEIS3Q99687 375 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 TUBA1CQ9BQE3 449 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 LMF2Q9BU23 707 aaKnown RBP4.47□□□□□ -1.69
LINC00560-201ENST00000564593 POLR3CQ9BUI4 534 aaPredicted RBP4.47□□□□□ -1.69
LINC00560-201ENST00000564593 SLC25A23Q9BV35 468 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 C1QTNF4Q9BXJ3 329 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 FAM129AQ9BZQ8 928 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 FKRPQ9H9S5 495 aa4.47□□□□□ -1.69
LINC00560-201ENST00000564593 SPIN1Q9Y657 262 aaPredicted RBP4.47□□□□□ -1.69
LINC00560-201ENST00000564593 A0A0G2JNG1 304 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 ASPDHA6ND91 283 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 RECQL5O94762 991 aaPredicted RBP4.46□□□□□ -1.7
LINC00560-201ENST00000564593 H1F0P07305 194 aaKnown RBP4.46□□□□□ -1.7
LINC00560-201ENST00000564593 GLULP15104 373 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 CSF2RAP15509 400 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 MCCP23508 829 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 PTAFRP25105 342 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 FUT6P51993 359 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 TERF1P54274 439 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 HNRNPKP61978 463 aaKnown RBP eCLIP4.46□□□□□ -1.7
LINC00560-201ENST00000564593 ROR1Q01973 937 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 RBPJQ06330 500 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 KIR2DS5Q14953 304 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 IZUMO4Q1ZYL8 232 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 HYAL4Q2M3T9 481 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 KLHL26Q53HC5 615 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 ASPRV1Q53RT3 343 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 PLA2G4FQ68DD2 849 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 PACS1Q6VY07 963 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 ZBTB49Q6ZSB9 765 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 MFN1Q8IWA4 741 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 FAM114A1Q8IWE2 563 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 THNSL1Q8IYQ7 743 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 NKAIN3Q8N8D7 197 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 OR5M8Q8NGP6 311 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 ATL1Q8WXF7 558 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 SORCS1Q8WY21 1168 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 SFXN2Q96NB2 322 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 ZNF558Q96NG5 402 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 SLX1AQ9BQ83 275 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms