RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	OR4F6	Q8NGB9	312 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CHAC2	Q8WUX2	184 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	DNAJB3	Q8WWF6	145 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	UCK2	Q9BZX2	261 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	KPNA6	O60684	536 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	LIMK2	P53671	638 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RBBP7	Q16576	425 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ZCCHC23	Q6ZST2	131 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TRIM48	Q8IWZ4	208 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CAMKK1	Q8N5S9	505 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SSX3	Q99909	188 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RNF112	Q9ULX5	631 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CA5B	Q9Y2D0	317 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PICALM	Q13492	652 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MEDAG	Q5VYS4	303 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TATDN1	Q6P1N9	297 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	OR6B3	Q8NGW1	331 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	NXPE2	Q96DL1	559 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MARK4	Q96L34	752 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	GSDMC	Q9BYG8	508 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SMCO4	Q9NRQ5	59 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ADAMDEC1	O15204	470 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PRAF2	O60831	178 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288		Q3C1V9	767 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CCDC107	Q8WV48	283 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	REPS1	Q96D71	796 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	DMRTB1	Q96MA1	342 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	DPYSL5	Q9BPU6	564 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CYBB	P04839	570 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CASP3	P42574	277 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SEMA3A	Q14563	771 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PTGES3	Q15185	160 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CDON	Q4KMG0	1287 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ATG9B	Q674R7	924 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SPRED1	Q7Z699	444 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TRNT1	Q96Q11	434 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PFDN5	Q99471	154 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RNF121	Q9H920	327 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	NUMA1	Q14980	2115 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TNFRSF11B	O00300	401 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CERS1	P27544	350 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SNTA1	Q13424	505 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ELP5	Q8TE02	316 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	NSUN4	Q96CB9	384 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PPIL3	Q9H2H8	161 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TFB2M	Q9H5Q4	396 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC43A1	O75387	559 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CDKN2C	P42773	168 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CYCS	P99999	105 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SCARF1	Q14162	830 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TRAM1	Q15629	374 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MBLAC2	Q68D91	279 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PARP16	Q8N5Y8	322 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF669	Q96BR6	464 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HOXA10	P31260	410 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ETV4	P43268	484 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TPMT	P51580	245 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	YWHAZ	P63104	245 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PFKFB4	Q16877	469 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	GANC	Q8TET4	914 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC13A3	Q8WWT9	602 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TCEAL4	Q96EI5	215 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288		L7N2F9	121 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ANXA3	P12429	323 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CLCN5	P51795	746 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RALGPS2	Q86X27	583 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PGBD3	Q8N328	593 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PWWP2A	Q96N64	755 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	OR2M2	Q96R28	347 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SNX15	Q9NRS6	342 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PRSS51	A0A1B0GVH4	220 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	FOXO6	A8MYZ6	492 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	C9	P02748	559 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	UNG	P13051	313 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HPCAL1	P37235	193 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CEACAM7	Q14002	265 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SIM2	Q14190	667 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PON2	Q15165	354 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	C3orf67	Q6ZVT6	689 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC22A15	Q8IZD6	547 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RUSC1	Q9BVN2	902 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	B4GALT4	O60513	344 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	OTC	P00480	354 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CHRM3	P20309	590 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	L1CAM	P32004	1257 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TGFB2	P61812	414 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	DSC3	Q14574	896 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PXDC1	Q5TGL8	231 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PTER	Q96BW5	349 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	UNKL	Q9H9P5	680 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	EMC7	Q9NPA0	242 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RYDEN	Q9NUL5	291 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RBM22	Q9NW64	420 aa	Known RBP eCLIP	4.2	□□□□□ -1.74	6e-8	■■■■□ 25.6
MACF1-231	ENST00000564288	MYH7B	A7E2Y1	1941 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SEC22B	O75396	215 aa		4.19	□□□□□ -1.74
MACF1-231	ENST00000564288	ITGB6	P18564	788 aa		4.19	□□□□□ -1.74
MACF1-231	ENST00000564288	IL4R	P24394	825 aa		4.19	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC13A2	Q13183	592 aa		4.19	□□□□□ -1.74
MACF1-231	ENST00000564288	EPHX4	Q8IUS5	362 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 67 ms