RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 DNAJC21Q5F1R6 531 aaKnown RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 STEAP4Q687X5 459 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 MRNIPQ6NTE8 343 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 TMEM71Q6P5X7 295 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 ZNF549Q6P9A3 640 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 WDR74Q6RFH5 385 aaPredicted RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 ZDHHC24Q6UX98 284 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 UNC5AQ6ZN44 842 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 MAATS1Q7Z4T9 603 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 PDZD3Q86UT5 571 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 PIM3Q86V86 326 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 TRIM48Q8IWZ4 208 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 RBM12BQ8IXT5 1001 aaKnown RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 AVL9Q8NBF6 648 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 PHC3Q8NDX5 983 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 OR4D9Q8NGE8 314 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 OR10G6Q8NH81 332 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 ELMO1Q92556 727 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 ZNF592Q92610 1267 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 RSC1A1Q92681 617 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 CXorf40BQ96DE9 158 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 LIN37Q96GY3 246 aaPredicted RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 CCDC74BQ96LY2 380 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 C12orf66Q96MD2 445 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 TCF12Q99081 682 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 TTC1Q99614 292 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 DPH5Q9H2P9 285 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 VPS37BQ9H9H4 285 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 EPB41L5Q9HCM4 733 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 ASCL3Q9NQ33 180 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 C20orf96Q9NUD7 363 aaPredicted RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 IMP3Q9NV31 184 aaKnown RBP8.34□□□□□ -1.07
UBR1-204ENST00000563239 WHRNQ9P202 907 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 GALPQ9UBC7 116 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 SLC24A2Q9UI40 661 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 SATB2Q9UPW6 733 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 MED16Q9Y2X0 877 aa8.34□□□□□ -1.07
UBR1-204ENST00000563239 PIKFYVEQ9Y2I7 2098 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 UNC13CQ8NB66 2214 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 CCDC187A0A096LP49 1063 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 DUX1O43812 170 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 BRINP1O60477 761 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 NIPSNAP2O75323 286 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 DXOO77932 396 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 UBXN7O94888 489 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 SLCO2B1O94956 709 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 TTC4O95801 387 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 C9P02748 559 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 TUBB4AP04350 444 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 SLC35G4P0C7Q5 338 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 ERVK-10P10266 1014 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 HGFP14210 728 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 TYRP1P17643 537 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 PAMP19021 973 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 GABRB3P28472 473 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 FMO4P31512 558 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 PPARGP37231 505 aaPredicted RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 ETV5P41161 510 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 SLC1A2P43004 574 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 MAPK9P45984 424 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 GFERP55789 205 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 EIF3BP55884 814 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 ARL4CP56559 192 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 PPP1CAP62136 330 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 GABREP78334 506 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 MPP1Q00013 466 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 TIAL1Q01085 375 aaKnown RBP eCLIP8.33□□□□□ -1.08
UBR1-204ENST00000563239 SLC7A5Q01650 507 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 CKAP4Q07065 602 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 BOP1Q14137 746 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 GBX1Q14549 363 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 BRD3Q15059 726 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 HIF1AQ16665 826 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 MAP9Q49MG5 647 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 HSP90AA5PQ58FG0 334 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 C3orf38Q5JPI3 329 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 SPANXN3Q5MJ09 141 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 ZNF470Q6ECI4 717 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 TRMT10BQ6PF06 316 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 IGF2-ASQ6U949 168 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 ARHGAP22Q7Z5H3 698 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 SDCCAG8Q86SQ7 713 aaPredicted RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 LRRC6Q86X45 466 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 SLC22A15Q8IZD6 547 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 PDIK1LQ8N165 341 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 MMGT1Q8N4V1 131 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 OTUD6BQ8N6M0 293 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.33□□□□□ -1.08
UBR1-204ENST00000563239 NOA1Q8NC60 698 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 RCBTB1Q8NDN9 531 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 NBEAQ8NFP9 2946 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 WDR36Q8NI36 951 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 ZFPM2Q8WW38 1151 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 SEC14L1Q92503 715 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 NCSTNQ92542 709 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 ART4Q93070 314 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 LRRC39Q96DD0 335 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 NXPE2Q96DL1 559 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 TRIM44Q96DX7 344 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms