RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CAMTA2O94983 1202 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 PFKFB1P16118 471 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 PDGFRAP16234 1089 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 ACHEP22303 614 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 HRH2P25021 359 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 HNRNPKP61978 463 aaKnown RBP eCLIP3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 SNRPEP62304 92 aaKnown RBP3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 COG7P83436 770 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 PDE1BQ01064 536 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 YWHAHQ04917 246 aaPredicted RBP3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 ILF3Q12906 894 aaKnown RBP eCLIP3.14□□□□□ -1.911e-9■■■■■ 32.3
SHCBP1-202ENST00000563219 ZBTB17Q13105 803 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 PTK6Q13882 451 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 MVPQ14764 893 aaKnown RBP3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 SLMAPQ14BN4 828 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC39A14Q15043 492 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 CBWD6Q4V339 395 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 RAB6CQ53S08 254 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 CBWD3Q5JTY5 395 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 ARMC4Q5T2S8 1044 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 TPRG1Q6ZUI0 275 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 USP43Q70EL4 1123 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 PIWIL3Q7Z3Z3 882 aaKnown RBP3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 GLRX5Q86SX6 157 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 GPR180Q86V85 440 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 TMEM219Q86XT9 240 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 FAM219AQ8IW50 185 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 SIX6OS1Q8N1H7 587 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 CARNMT1Q8N4J0 409 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 GCSAMQ8N6F7 178 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 TMCO5AQ8N6Q1 288 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF441Q8N8Z8 693 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 MSANTD4Q8NCY6 345 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 LMO3Q8TAP4 145 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 GDAP1Q8TB36 358 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 TAS1R2Q8TE23 839 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC20A1Q8WUM9 679 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC44A1Q8WWI5 657 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 FIG4Q92562 907 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 PIGTQ969N2 578 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 SPACA9Q96E40 222 aaPredicted RBP3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 STAMBPL1Q96FJ0 436 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 IGSF21Q96ID5 467 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 FERMT1Q9BQL6 677 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 MGME1Q9BQP7 344 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 KATNB1Q9BVA0 655 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 FNDC11Q9BVV2 318 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 C1QTNF4Q9BXJ3 329 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 RAB6CQ9H0N0 254 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 SEMA6AQ9H2E6 1030 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 MMP27Q9H306 513 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 UBTD1Q9HAC8 227 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 KLHL1Q9NR64 748 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 TXLNGQ9NUQ3 528 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 MALT1Q9UDY8 824 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 PCDHGB1Q9Y5G3 927 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 RPGRIP1LQ68CZ1 1315 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 TAF1P21675 1872 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 SAA2-SAA4A0A096LPE2 208 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 A0A0G2JPF8 293 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 A0A1B0GUV1 79 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 A0A1W2PPM1 405 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 PLSCR5A0PG75 271 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 OR6C76A6NM76 312 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 HNRNPCL3B7ZW38 293 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 TULP2O00295 520 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 PSMA7O14818 248 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 XRCC3O43542 346 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 PRAMEF11O60813 436 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 RECQL5O94762 991 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 ACSL3O95573 720 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 SNRNP70P08621 437 aaKnown RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 HNRNPCL4P0DMR1 293 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 HLA-DOBP13765 273 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 MYOD1P15172 320 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 PTMSP20962 102 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 KCNA5P22460 613 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 ATP5DP30049 168 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 BMXP51813 675 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 RELQ04864 619 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 RUNX1T1Q06455 604 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 ACSM1Q08AH1 577 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 C17orf67Q0P5P2 114 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 COASYQ13057 564 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 PLA2G7Q13093 441 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF234Q14588 700 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 KLHL26Q53HC5 615 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 NHSL2Q5HYW2 709 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 SPSB3Q6PJ21 355 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 FIGLAQ6QHK4 219 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 RAD9BQ6WBX8 426 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF704Q6ZNC4 412 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 TUBA1AQ71U36 451 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 Q75L30 129 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 OTOAQ7RTW8 1153 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 SFR1Q86XK3 245 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 KMT5CQ86Y97 462 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 MFN1Q8IWA4 741 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 FAM114A1Q8IWE2 563 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 ODF3L1Q8IXM7 274 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms