RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MFSD3Q96ES6 412 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 NUDT22Q9BRQ3 303 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 SLC40A1Q9NP59 571 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 SAMD15Q9P1V8 674 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 PSMD13Q9UNM6 376 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 UBR5O95071 2799 aaPredicted RBP16.2■□□□□ 0.18
CDT1-202ENST00000562747 FAM237BA0A1B0GVD1 139 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 GOLGA8MH3BSY2 632 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 CD3EAPO15446 510 aaKnown RBP16.19■□□□□ 0.18
CDT1-202ENST00000562747 FTH1P02794 183 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 OR56A5P0C7T3 313 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 PAMP19021 973 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 ITIH1P19827 911 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 TTPAP49638 278 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 LIMK2P53671 638 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 KCNC4Q03721 635 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 RPA4Q13156 261 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 TRA2AQ13595 282 aaKnown RBP eCLIP16.19■□□□□ 0.18
CDT1-202ENST00000562747 DHX34Q14147 1143 aaKnown RBP16.19■□□□□ 0.18
CDT1-202ENST00000562747 RPE65Q16518 533 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 ZNF658BQ4V348 819 aaPredicted RBP16.19■□□□□ 0.18
CDT1-202ENST00000562747 KIAA0930Q6ICG6 404 aaPredicted RBP16.19■□□□□ 0.18
CDT1-202ENST00000562747 CASC4Q6P4E1 433 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 TMEM71Q6P5X7 295 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 WDR74Q6RFH5 385 aaPredicted RBP16.19■□□□□ 0.18
CDT1-202ENST00000562747 ZNF574Q6ZN55 896 aaPredicted RBP16.19■□□□□ 0.18
CDT1-202ENST00000562747 HOOK3Q86VS8 718 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 EXTL1Q92935 676 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 TBC1D10AQ9BXI6 508 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 WWP1Q9H0M0 922 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 COG4Q9H9E3 785 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 PISDQ9UG56 409 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 ACSL6Q9UKU0 697 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 PRSS21Q9Y6M0 314 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 AHCTF1Q8WYP5 2266 aa16.19■□□□□ 0.18
CDT1-202ENST00000562747 NAV2Q8IVL1 2488 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 IGHV5-10-1A0A0J9YXX1 117 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 SLC35G4P0C7Q5 338 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 MTHFD1P11586 935 aaKnown RBP16.18■□□□□ 0.18
CDT1-202ENST00000562747 IVDP26440 423 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 ARNTP27540 789 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 CSF2RBP32927 897 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 ETV5P41161 510 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 PPM1FP49593 454 aaPredicted RBP16.18■□□□□ 0.18
CDT1-202ENST00000562747 SEMA3AQ14563 771 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 PHF19Q5T6S3 580 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 CAPRIN2Q6IMN6 1127 aaKnown RBP16.18■□□□□ 0.18
CDT1-202ENST00000562747 ZNF449Q6P9G9 518 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 VASH2Q86V25 355 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 LILRA3Q8N6C8 439 aaPredicted RBP16.18■□□□□ 0.18
CDT1-202ENST00000562747 ZFPM2Q8WW38 1151 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 INSM2Q96T92 566 aaPredicted RBP16.18■□□□□ 0.18
CDT1-202ENST00000562747 CMKLR1Q99788 373 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 ZMYND15Q9H091 742 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 SEMA6CQ9H3T2 930 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 PDP2Q9P2J9 529 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 FAM8A1Q9UBU6 413 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 LOXL2Q9Y4K0 774 aa16.18■□□□□ 0.18
CDT1-202ENST00000562747 PRAMEF33A0A0G2JMD5 474 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 SMAPO00193 183 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 LIN7AO14910 233 aaPredicted RBP16.17■□□□□ 0.18
CDT1-202ENST00000562747 HGSO14964 777 aaPredicted RBP16.17■□□□□ 0.18
CDT1-202ENST00000562747 OR1I1O60431 355 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 PRAMEF10O60809 474 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 UBXN7O94888 489 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 VAPBO95292 243 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 POLBP06746 335 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 THRAP10827 490 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 WT1P19544 449 aaPredicted RBP16.17■□□□□ 0.18
CDT1-202ENST00000562747 CD151P48509 253 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 GPR18Q14330 331 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 IZUMO3Q5VZ72 239 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 MRNIPQ6NTE8 343 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 CES3Q6UWW8 571 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 TMEM135Q86UB9 458 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 GPR150Q8NGU9 434 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 NCSTNQ92542 709 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 CCDC74BQ96LY2 380 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 RMDN2Q96LZ7 410 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 C12orf66Q96MD2 445 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 TSSK1BQ9BXA7 367 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 OR52A5Q9H2C5 316 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 IMP3Q9NV31 184 aaKnown RBP16.17■□□□□ 0.18
CDT1-202ENST00000562747 FOXJ2Q9P0K8 574 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 AKAP7Q9P0M2 348 aaPredicted RBP16.17■□□□□ 0.18
CDT1-202ENST00000562747 MARCH4Q9P2E8 410 aaPredicted RBP16.17■□□□□ 0.18
CDT1-202ENST00000562747 HEBP2Q9Y5Z4 205 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 PIKFYVEQ9Y2I7 2098 aa16.17■□□□□ 0.18
CDT1-202ENST00000562747 TLN1Q9Y490 2541 aaKnown RBP16.16■□□□□ 0.18
CDT1-202ENST00000562747 PTPN13Q12923 2485 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 PRMT5O14744 637 aaPredicted RBP16.16■□□□□ 0.18
CDT1-202ENST00000562747 PFDN6O15212 129 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 TTI1O43156 1089 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 USP1O94782 785 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 LIPCP11150 499 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 ITGB6P18564 788 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 NDUFS1P28331 727 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 MAPK9P45984 424 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 ARCN1P48444 511 aaKnown RBP16.16■□□□□ 0.18
CDT1-202ENST00000562747 PLOD1Q02809 727 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms