RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 DPY19L3Q6ZPD9 716 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 C11orf96Q7Z7L8 435 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 GOLM1Q8NBJ4 401 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 SHKBP1Q8TBC3 707 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 NXPE3Q969Y0 559 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 KIAA1191Q96A73 305 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 SLC22A18Q96BI1 424 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 C19orf60Q96EN9 201 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 MECRQ9BV79 373 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 UGT2B28Q9BY64 529 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 SLC29A3Q9BZD2 475 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 CD207Q9UJ71 328 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 NDRG2Q9UN36 371 aaKnown RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 MCM3APO60318 1980 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 TTC34A8MYJ7 566 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 KCNJ13O60928 360 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SEMA3DO95025 777 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CPSF4O95639 269 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 ALPIP09923 528 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 HNRNPLP14866 589 aaKnown RBP eCLIP7.43□□□□□ -1.22
TCF4-216ENST00000562680 IL32P24001 234 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 NCALDP61601 193 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 HERVK_113P63132 956 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 PRKCQQ04759 706 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 KCNC3Q14003 757 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 AP5B1Q2VPB7 878 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 FAM124AQ86V42 546 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 DHFR2Q86XF0 187 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 TMEM130Q8N3G9 435 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 HM13Q8TCT9 377 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CAPSLQ8WWF8 208 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 RERGQ96A58 199 aaPredicted RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 MSANTD3Q96H12 275 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 ERVK-6Q9BXR3 956 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 TXLNGYQ9BZA5 131 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 IMP3Q9NV31 184 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 ADGRE2Q9UHX3 823 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 MRPS33Q9Y291 106 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 RBBP6Q7Z6E9 1792 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 CXorf49A8MYA2 514 aaPredicted RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 TK2O00142 265 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SLC16A5O15375 505 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 DNAJA2O60884 412 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 TULP3O75386 442 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CLDN7O95471 211 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CMPK1P30085 196 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CDH13P55290 713 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SPIDRQ14159 915 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 GNA13Q14344 377 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CPSF6Q16630 551 aaKnown RBP eCLIP7.43□□□□□ -1.22
TCF4-216ENST00000562680 MAPKAPK3Q16644 382 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 LSM12Q3MHD2 195 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 FAM98BQ52LJ0 330 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 EMC10Q5UCC4 262 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 TRNP1Q6NT89 227 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 GPR180Q86V85 440 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CFAP206Q8IYR0 622 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CYP4X1Q8N118 509 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 C12orf76Q8N812 135 aaPredicted RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 TTLQ8NG68 377 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 DNAJB8Q8NHS0 232 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 NELL1Q92832 810 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 HOPXQ9BPY8 73 aaPredicted RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 CPEB1Q9BZB8 566 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 ROGDIQ9GZN7 287 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 MUC13Q9H3R2 512 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 PLGRKTQ9HBL7 147 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 KRCC1Q9NPI7 259 aaPredicted RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 FBXL12Q9NXK8 326 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 PADI4Q9UM07 663 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CITO14578 2027 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 KIAA1217Q5T5P2 1943 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 IGLV3-10A0A075B6K4 115 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 DPPA5A6NC42 116 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 PEX11AO75192 247 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 TIE1P35590 1138 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 WDR4P57081 412 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 NUP107P57740 925 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 RPL38P63173 70 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 NIPAL4Q0D2K0 466 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 NAE1Q13564 534 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 GTF2H2Q13888 395 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 DPY19L1Q2PZI1 675 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 GTF2H2CQ6P1K8 395 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 PAQR3Q6TCH7 311 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 KIAA1958Q8N8K9 716 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 GLB1L3Q8NCI6 653 aaPredicted RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 KHSRPQ92945 711 aaKnown RBP eCLIP7.43□□□□□ -1.223e-7■■■■□ 23.2
TCF4-216ENST00000562680 NELL2Q99435 816 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 RTKNQ9BST9 563 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SMG9Q9H0W8 520 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 PNPOQ9NVS9 261 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 TMEM5Q9Y2B1 443 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 OR2AG2A6NM03 316 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 KMOO15229 486 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 ZDHHC11BP0C7U3 371 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CDH3P22223 829 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 MPSTP25325 297 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 ECHS1P30084 290 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms